Gene Pden_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2922 
Symbol 
ID4581489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp84573 
End bp85238 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content73% 
IMG OID639770249 
ProductGntR family transcriptional regulator 
Protein accessionYP_916702 
Protein GI119385647 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0278565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.64241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG GATCCGAAGA AACCCTGGCG GTCCGCATCA GCCGCGTGCT GGCCGACCGG 
ATCGTATCGG GCGAGATCGG CCCGGGCGAA CGCCTGCGCC AGGACCGCAT CGCCGAGGAA
TTCGGCGCCA GCCACGTCCC GGTGCGCGAG GCCTTCCGCC GGCTGGAGGC CCAGGGCCTG
GCGATCAGCG AACCGCGCCG CGGCGTCCGC GTCGCCGCCT TCGACCTGCC CGAGGTCAAG
GAAGTGGCCG AGATGCGCGC CGCGCTCGAG GAACTCGCCC TGCGCCATGC CGCGCCGCAC
CTGACCCCGG CGATCCTCAA TGCCGCGGAA GAGGCGACCA AGGCCGGCGA CGCCTCGCGC
GACGTCCGCT CGTGGGAGGC GGCGAACCGC CGTTTCCACA AGCTGATCCT GACCCCCTGC
GCCATGCCGC GCCTGCTCGC CGCCATCGAC GACCTGCATG CCGCCAGCGC GCGTTTCCTT
TTCGCCGCCT GGCAATCGAA CTGGGAAACG CGGACCGACC ACGACCACCG CGCCATCCTG
GCCGCATTGC GCAAGGGCGA CGTGGACACC GCCTGCGCCA CGCTGGCGCG CCATGTGCGC
TGGATCGGCC GCCGCCCGGC GCCCTCGACC AGCGGCAAGC CCGACGCCTT CGCCATCCAC
GGCTAG
 
Protein sequence
MSAGSEETLA VRISRVLADR IVSGEIGPGE RLRQDRIAEE FGASHVPVRE AFRRLEAQGL 
AISEPRRGVR VAAFDLPEVK EVAEMRAALE ELALRHAAPH LTPAILNAAE EATKAGDASR
DVRSWEAANR RFHKLILTPC AMPRLLAAID DLHAASARFL FAAWQSNWET RTDHDHRAIL
AALRKGDVDT ACATLARHVR WIGRRPAPST SGKPDAFAIH G