Gene Pden_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2918 
SymbolbioD 
ID4581485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp81340 
End bp81948 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content74% 
IMG OID639770245 
Productdithiobiotin synthetase 
Protein accessionYP_916698 
Protein GI119385643 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.295464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.67832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTCG TGGGCACCGA TACGGGCATC GGCAAGACCG TGTTCAGCGC CGGGCTGGCC 
CGCGCGCTGG GCGCGAGTTA TTGGAAGCCG GTGCAGGCGG GGCTGGAGGA GGAGACCGAC
AGCGAGGTCG TGGCGCGGCT TTCGGGCCGG CCGGTGCTGG CCGAGGCGTA TCGGCTGCGC
CTGCCCGCCT CGCCGCATCT GGCGGCCGAG CGCGAGGGGG TGGCGATCGA TCCGGCGCGG
CTGGCCTTGC CCCCGGTGGC CCCGCTGGTG GTCGAGGGCG CGGGCGGGCT GATGGTGCCG
CTGACCCGGC ACCTGCTCTA TTTGCAGGTG ATCGCGGGCT GGGGGGCGCC GGTGGTGCTG
TGCTGCCGCA CCGCGCTGGG CACGATCAAC CATTCGCTGC TGTCGCTGAC GGCGCTGCGG
GCGGCCGGTT GCCGGGTGGC GGGCGTGGCC TTCATCGGCG AGGAGATGGC GGACAGCCGG
CGGGTGATCT GCGAGATCGG CGCGGTGCGC GACCTGGGCC GGCTGCCGGT GCTGGAGCGG
GTGACGGCCG AGGCGCTGGC CGATGCCTTT GCCGGCATCG ACCTGGCGGC GATCCGCGAG
GTGTCGTGA
 
Protein sequence
MIVVGTDTGI GKTVFSAGLA RALGASYWKP VQAGLEEETD SEVVARLSGR PVLAEAYRLR 
LPASPHLAAE REGVAIDPAR LALPPVAPLV VEGAGGLMVP LTRHLLYLQV IAGWGAPVVL
CCRTALGTIN HSLLSLTALR AAGCRVAGVA FIGEEMADSR RVICEIGAVR DLGRLPVLER
VTAEALADAF AGIDLAAIRE VS