Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2918 |
Symbol | bioD |
ID | 4581485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 81340 |
End bp | 81948 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639770245 |
Product | dithiobiotin synthetase |
Protein accession | YP_916698 |
Protein GI | 119385643 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0132] Dethiobiotin synthetase |
TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.295464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.67832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGTCG TGGGCACCGA TACGGGCATC GGCAAGACCG TGTTCAGCGC CGGGCTGGCC CGCGCGCTGG GCGCGAGTTA TTGGAAGCCG GTGCAGGCGG GGCTGGAGGA GGAGACCGAC AGCGAGGTCG TGGCGCGGCT TTCGGGCCGG CCGGTGCTGG CCGAGGCGTA TCGGCTGCGC CTGCCCGCCT CGCCGCATCT GGCGGCCGAG CGCGAGGGGG TGGCGATCGA TCCGGCGCGG CTGGCCTTGC CCCCGGTGGC CCCGCTGGTG GTCGAGGGCG CGGGCGGGCT GATGGTGCCG CTGACCCGGC ACCTGCTCTA TTTGCAGGTG ATCGCGGGCT GGGGGGCGCC GGTGGTGCTG TGCTGCCGCA CCGCGCTGGG CACGATCAAC CATTCGCTGC TGTCGCTGAC GGCGCTGCGG GCGGCCGGTT GCCGGGTGGC GGGCGTGGCC TTCATCGGCG AGGAGATGGC GGACAGCCGG CGGGTGATCT GCGAGATCGG CGCGGTGCGC GACCTGGGCC GGCTGCCGGT GCTGGAGCGG GTGACGGCCG AGGCGCTGGC CGATGCCTTT GCCGGCATCG ACCTGGCGGC GATCCGCGAG GTGTCGTGA
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Protein sequence | MIVVGTDTGI GKTVFSAGLA RALGASYWKP VQAGLEEETD SEVVARLSGR PVLAEAYRLR LPASPHLAAE REGVAIDPAR LALPPVAPLV VEGAGGLMVP LTRHLLYLQV IAGWGAPVVL CCRTALGTIN HSLLSLTALR AAGCRVAGVA FIGEEMADSR RVICEIGAVR DLGRLPVLER VTAEALADAF AGIDLAAIRE VS
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