Gene Pden_2906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2906 
Symbol 
ID4581473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp68209 
End bp69336 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content69% 
IMG OID639770233 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_916686 
Protein GI119385631 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGA CCGAGGAACA GGAACAGATC CGCGACGCCG CCCGCGACTT TGCGCGGGAA 
CGGCTGGCGC CGGGGGCGGC GCAACGCGAC CGCGAGCACG CCTTTCCGCG CGCCGAGCTG
ACCGAGATGG GCGAGCTGGG TTTCCTGGGC ATGCTGGTGC CCGAGGAGCA TGGCGGGTCC
GAGACCGGCG CGGTCGCCTA TGCGCTGGCG CTGGAAGAGA TCGCGGCGGC GGACGGGGCG
TGCTCGACCA TCATGTCGGT GCACAGCTCG GTCGGCTGCG TGCCGATCCT GCGCTTTGGC
ACCGACGAGC AGAAGGCGCG CTTCCTGCCG AAGATGGCGA GCGGCGAGTG GATCGGGGGT
TTCGCGCTGA CCGAGCCGCA TGCCGGCTCG GACGCGTCGA ACCTGCGCAC CAAGGCGCGG
CGCGAGGGCG ACCATTACGT CATCGACGGG GCCAAGCAGT TCATCTCCTC GGGCAAGAAC
GGCAAGGTGG TGATCGTCTT TGCGGTGACG GATGCGGCGG CGGGCAAGAA GGGGATATCC
GCCTTCATCG TGCCGACGGA TACGCCGGGC TACGAGGTGG TCTCGGTCGA GCACAAGCTG
GGGCAGCACA GCTCGGACAC CTGCGCGCTG GCATTCACCG GCATGCGGGT GCCGGTCGAG
AACCGGCTGG GCGCCGAGGG CGAGGGCTAC CGGATCGCGC TGTCGAACCT GGAGGGCGGG
CGCATCGGCA TCGCCGCGCA GGCGGTCGGC ATGGCGCGCG GCGCCTATGA GGCGGCGCTG
GCCTATGCGC GGGAACGCAT CACCTTCGGC CGACCGATCA TCGAGCATCA GGCGGTGGCC
TTCAGGCTGG CGGACATGGC GACGCAGATC GACGCGGCGC GGCTGATGGT TCTGCGCGCC
GCCATGCTGC GCGAGGCGGG CAAGCCCTGC CTGACCGAAG CCAGCATGGC CAAGCTTTTC
GCCTCGGAAA TGGCGGAAAG GGTCTGTTCG GCGGCGATCC AGCTGCATGG CGGCTATGGC
TACCTGGCCG ATTACCCGGT CGAGCGCATC TATCGCGACG TGCGCGTCTG CCAGATCTAC
GAGGGGACGA GCGAGGTGCA GCGCCTCGTC ATCGCCCGCA ACCTGTGA
 
Protein sequence
MMLTEEQEQI RDAARDFARE RLAPGAAQRD REHAFPRAEL TEMGELGFLG MLVPEEHGGS 
ETGAVAYALA LEEIAAADGA CSTIMSVHSS VGCVPILRFG TDEQKARFLP KMASGEWIGG
FALTEPHAGS DASNLRTKAR REGDHYVIDG AKQFISSGKN GKVVIVFAVT DAAAGKKGIS
AFIVPTDTPG YEVVSVEHKL GQHSSDTCAL AFTGMRVPVE NRLGAEGEGY RIALSNLEGG
RIGIAAQAVG MARGAYEAAL AYARERITFG RPIIEHQAVA FRLADMATQI DAARLMVLRA
AMLREAGKPC LTEASMAKLF ASEMAERVCS AAIQLHGGYG YLADYPVERI YRDVRVCQIY
EGTSEVQRLV IARNL