| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2872 |
|---|
| Symbol | |
|---|
| ID | 4581459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 39349 |
|---|
| End bp | 40356 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639770199 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_916652 |
|---|
| Protein GI | 119385597 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.417432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC CCTATGTGAT CGGGATCGGC AATGCCGTCA TGGACGTGAT CGCGCCGACC
TCGGATGCGA GCCTGGACCG GCTGCGCATC GAAAAGGGGA TCATGCAGCT GATCGACCGC
GAACGCTCGG AATTCCTGAT GGCGGCGCAA TCGGCCGATG CGGATGCGGC CAAGGCGCGG
CTGGTGCCGG GCGGTTCGGT GGCGAACACG CTGGCGGGGC TGGGGATGCT GGGGCTGCGC
ACCGCCTTCA TCGGCCGCGT GGCGGGCGAT CCGCTGGGGC TGAGCTATGC CGAGCAGACC
GAGCAGCAGG GAACGGTCTT CGTCAATCCG CCGGTGGCGG GCGAGGTGCT GCCGACCTCG
CGTTCGATCA TCTTCGTGAC CCCGGATGGC GAGCGGTCGA TGAACACCTA TCTGGGCATT
TCGGCCGAGC TGGGGGCCGA GGACGTGAAC CCCGCGACCT TCAGCGGTGC GGACTGGCTG
TTCCTGGAGG GTTATCTGTT CGACAAGGAT GCCGGCAAGG CGGCGTTCCT CAAGGCGGCC
GATGCCTGTC ACAAGGCGGG CGGCCAGGCG GGGATCGCGC TGTCCGACCC GTTCTGCGTC
GACCGCCACC GGGCGGATTT CCGGCGGCTG GTGGCCGGGC CGATGGATTA CGTCATCGGC
AATATCCATG AATGGCAGTC GCTTTATCAG GTCGAGGATC TGGAAGAGGC CCTGCGGCTG
GCCAGCGCCG ATTGCGGTAC GGTGATCTGC ACCCGCTCGG GCGAGGATGC GATCCTGATC
CGCGGGGACG AGCGGGTGAC GGCGCCGGTG CATCGCGTGG TGCCGGTGGA CGCGACCGGG
GCGGGCGACC AGTTCGCTGC CGGGCTGATC TATGGGCTGG CCATCGGCGC CGATCTGGCG
GCGGCGGGGC GCATGGGCTG CATCGCGGCA GCCGAGGTGA TCAGCCATGT CGGCGCCCGG
CCCGAGAGCG ACCTGCGCGC GGCGTTCCGG GCCGAGGGGC TGGTCTGA
|
|---|
| Protein sequence | MTTPYVIGIG NAVMDVIAPT SDASLDRLRI EKGIMQLIDR ERSEFLMAAQ SADADAAKAR
LVPGGSVANT LAGLGMLGLR TAFIGRVAGD PLGLSYAEQT EQQGTVFVNP PVAGEVLPTS
RSIIFVTPDG ERSMNTYLGI SAELGAEDVN PATFSGADWL FLEGYLFDKD AGKAAFLKAA
DACHKAGGQA GIALSDPFCV DRHRADFRRL VAGPMDYVIG NIHEWQSLYQ VEDLEEALRL
ASADCGTVIC TRSGEDAILI RGDERVTAPV HRVVPVDATG AGDQFAAGLI YGLAIGADLA
AAGRMGCIAA AEVISHVGAR PESDLRAAFR AEGLV
|
|---|
| |