Gene Pden_2803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2803 
Symbol 
ID4581382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2824229 
End bp2825167 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content67% 
IMG OID639770129 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_916583 
Protein GI119385527 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.428176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGGA CCGATATCAG CCGCCGCCAA GCCATGCTCA TCGGCGGCGC GCTGCCCATG 
GCTCTGGTGC TGCCCGCGCA TGCCCAGACC GCCCCCGCCC AGCCGGCGGG CGAGGCGCCC
GCCTTTCTCG GCCGCGCCAA CACGATCCAG CTGGGCGGCT TCGAGGTGAC GACGTTGTTC
GGTGGCGGGA GCATGAGCGA CAATCCGATC GAGACCTTCG GCCTCAATGC CGATCCGGCC
GAGTTCGAAA GCCTCAGCGC CGAGAATTTC ATCCCCGCCG ACCGCAGCGG CGGCTCCTAT
ACGATGACGC TGGTGCGCAC GCCCGATGCG CTGGTGCTGT TCGACACCGG CATGGTCCCG
GCCAACAACG CCGCCTCGAT GGCGCAGGCC GGGGTCAAGC CCGAGGACGT GACCCATGTC
GTGCTGACCC ATATGCACGG CGACCATATC GGCGGGCTGA TGGATGGCGA GGCTCCGGCC
TTTCCCAATG CCGAGCTGAT CCTGCCCCGC CCCGAGAACG ACTATTGGGC GGCCAATCCC
AGCGAGGCCT ATACCGCCAA GGTGGTACCG CTGCTGGACA AGGCGCGGCA GATCGAGGGG
ACCGAGGAAA TCCTGCCCGG CATCAAGGCC GAGCAGGCCC ACGGCCACAC GCCCGGCCAC
ACCACCTATC TGCTGGAAAG CGACGGGCAG CGGCTGCTGA TCACCGGCGA CAGCTTCAAC
CACTATGTCT ATTCGGTGCA GCGCCCGGCC TGGCATGTGC GCTTCGACGT GGACAAGGAA
CAGGGCGCGG CCACGCGCCA GGCGGTTCTG GCCCGGCTGG CCGAGGAAAA GATCCCCTTC
ATCGGCTATC ACATGCCCTT CCCGGGCTTG GGCTTCATCG CCCCGAACGG CGAGGGTTCC
TGGCGCTTCG TGCCCGCGAC CTATCAGTTC GCCGGCTGA
 
Protein sequence
MFRTDISRRQ AMLIGGALPM ALVLPAHAQT APAQPAGEAP AFLGRANTIQ LGGFEVTTLF 
GGGSMSDNPI ETFGLNADPA EFESLSAENF IPADRSGGSY TMTLVRTPDA LVLFDTGMVP
ANNAASMAQA GVKPEDVTHV VLTHMHGDHI GGLMDGEAPA FPNAELILPR PENDYWAANP
SEAYTAKVVP LLDKARQIEG TEEILPGIKA EQAHGHTPGH TTYLLESDGQ RLLITGDSFN
HYVYSVQRPA WHVRFDVDKE QGAATRQAVL ARLAEEKIPF IGYHMPFPGL GFIAPNGEGS
WRFVPATYQF AG