| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2801 |
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| Symbol | truB |
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| ID | 4581380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2822391 |
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| End bp | 2823287 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639770127 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_916581 |
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| Protein GI | 119385525 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.404125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAA AAAAGGGACG CGAGATCCAC GGTTGGCTGA TCGTGGACAA GCCGGCCGGT
ATCGGCTCGA CCGACGTGGT CGGCAAGGTC CGCTGGGCAC TGGACGCGAA GAAGGCCGGG
CATGCCGGGA CGCTGGACCC GGATGCGACC GGCGTGCTGG CCGTGGCGCT GGGAGAGGCG
ACCAAGACCG TGCCGATCCT GACCGACGCG CTGAAAGCCT ATGACTTCAC GGTAAGCTGG
GGCGCCGAGA CCTCGACCGA CGATGCCTCG GGCGGGGTGG TGAAAACCAG CGACGCGCGC
CCGGACGAGG CGGCGATCCG CGCCGCCCTG CCGGAATTCA CCGGCGAGAT CATGCAGGTT
CCCCCCGCCG TCTCGGCCGT GCGCGTCGAT GGCGCGCGGG CCTATGACCT CGCGCGAGAG
GGCGAGGTGG TCGAGCTTGC CGCCCGTCCG CTTTGGGTGG AATCGCTGGA GCTGCTGGGC
GCGGCCCGCG ACAGCGCCGA GCTGCGCATG GTCTGCGGCA AGGGCGGCTA TGTGCGCAGC
ATTGCCCGCG ACCTTGGCCG CAAGCTGGGC TGCCTTGGCC ATGTCGCGCA ACTGCGCCGC
ATCTGGTCGG GGCCCTTCGA GGCCGGGGAC GGCTTTGCCT TCGACCGCAT CGACCGTGCC
AACCAGGCCG AGATCGAGGC GGCGCTGCTG CCCCTGCAAG CCGCGCTGGC CGACCTGCCC
GAGATGCAGG CGACCGAGAT CGGCGCCACC CGCATCCTGA ACGGCAATCC CGGCCAGGTG
CTGGGCCATG CCGAATTCGG CGAGGAAGTC TGGGTCAGCC GCAACGGCCG CGCACTGTGC
ATCGGTCGCT ACATGGGCGG CGAGGTGCAG CCCTCGCGCG TGTTCAACCT GGGCTAG
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| Protein sequence | MARKKGREIH GWLIVDKPAG IGSTDVVGKV RWALDAKKAG HAGTLDPDAT GVLAVALGEA
TKTVPILTDA LKAYDFTVSW GAETSTDDAS GGVVKTSDAR PDEAAIRAAL PEFTGEIMQV
PPAVSAVRVD GARAYDLARE GEVVELAARP LWVESLELLG AARDSAELRM VCGKGGYVRS
IARDLGRKLG CLGHVAQLRR IWSGPFEAGD GFAFDRIDRA NQAEIEAALL PLQAALADLP
EMQATEIGAT RILNGNPGQV LGHAEFGEEV WVSRNGRALC IGRYMGGEVQ PSRVFNLG
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