Gene Pden_2796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2796 
Symbol 
ID4581375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2818220 
End bp2818891 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID639770122 
Productnucleotidyl transferase 
Protein accessionYP_916576 
Protein GI119385520 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC CGATGATGAT CTTTGCCGCG GGCAAGGGCA CCCGCATGGC GCCGCTGACC 
GATGCGGTGC CGAAACCGTT GATTCCGGTC GGCGGCCAGA CGCTTCTGGA CCGCGCGCTG
GCGCTGGGGC GGCAGGCGGG CGTCGGTCGG GTGGCGCTGA ACATCCATCA TCTGGGACAC
CAGATCCGCG ATCACGTCGC AGGTCGGGAC ATTGCCGTTT CCGACGAATC CGACCTGCTG
CTGGAGACGG GGGGCGGCTT GCGCAAGGCG CTGCCGCTGC TTGGCCCCGG CCCTGTGGTC
ACGATGAACC CGGATGTGAT CTGGACCGGG CCGAACCCGA TCCGCGCGCT GCTGGACGGC
TGGCGCGAGG ACATGGACGC GCTCTTGATG CTGGTGCCGC TGGACCGGAC GCATGGCCGG
CAGGGCGGCG GCGATTTCAG CCTTGGTTCC ACAGGCCGGC TGATCCGCAA GGGCGATCTG
GTCTATGGCG GGGCGCAGAT CATCCGGCCC GACCGGCTGG CCGAGATCCC CGAACCGGCG
TTTTCGCTCA ACCGCCTCTG GGATCTGATG ATCGCCGAGG GCCGGGCTTG CGGCCTGATC
CACCCCGGCG CATGGTGCGA TGTTGGTCGC CCCGACTGCA TCCCGCTGGC CGAGGCGCTG
CTCGATGCCT GA
 
Protein sequence
MSLPMMIFAA GKGTRMAPLT DAVPKPLIPV GGQTLLDRAL ALGRQAGVGR VALNIHHLGH 
QIRDHVAGRD IAVSDESDLL LETGGGLRKA LPLLGPGPVV TMNPDVIWTG PNPIRALLDG
WREDMDALLM LVPLDRTHGR QGGGDFSLGS TGRLIRKGDL VYGGAQIIRP DRLAEIPEPA
FSLNRLWDLM IAEGRACGLI HPGAWCDVGR PDCIPLAEAL LDA