| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2795 |
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| Symbol | |
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| ID | 4581374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2815285 |
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| End bp | 2818227 |
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| Gene Length | 2943 bp |
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| Protein Length | 980 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639770121 |
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| Product | putative helicase/exonuclease |
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| Protein accession | YP_916575 |
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| Protein GI | 119385519 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3893] Inactivated superfamily I helicase |
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| TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACT GGCAGAACGG CGTCTTTGCC CTGCCTTGCG GCGCCGATTT CCCTGGTGCC
TTTGCCGAAG GACTGATCCG GCGCATGCGT CACCACCCGC CGCAAGAGAT GGCGCGGGTC
ACGGTCTATG CCAATTCCGG CCAGTCGCTG ATGGCGCTGC GCCAGGCGCT GATCCAGCGC
GGGCCGCTGC TTTTGCCCCG GCTGCGGTTG ATTGCCGATC TGGGCGGCGG TGCGGCCACC
ACGCCCCTGG CGCGCCGACT GGAACTGGGC CGGCTGATCG ACGCAGCGCT ACGCGCCCAG
CCGGATCTGG CTCAGGGGCA ATCGGTGCCG GAACTGGCTG CCTCGCTGGC TGGGCTGATG
GCCGAGATGC AGCTGGAGGG GCTGGACGCG CAGGCGCTGG ACCGCATCGA CGCCAGCGAA
CACGCCCAGC ATTGGGGACG GGCGCTGGCG TTCCTCAAGA TCGCCGCCGG CTATTACCTG
TCCGACCCGC CCCAGGATCG CGAGGCCCGG CAGCGCGCCG CGGCCGAGGC GCTGGCCGCA
GCCTGGGCGC GGGGCGAGAT GCTGCCGCAG GGCCCGGTGG TCGTTGCCGG CTCGACCGGC
TCGCATGGCG CGACGCGGGA CTTCATGCGC GCCGTCGCCC GGCTGCCGAT GGGCGCGGTG
GTGCTGCCGG GTTTCGATGC GGACCTGCCG CAGGGGGTCT GGGACGGGCT CGACCAACGC
TCCGAGGATC ACCCGCAGGC GCGCTATGCG CCGTTGGTGG CCGAGTTCGG CGCACCGGCG
GAATGGCTGG CGGACACCGC CCCCGACCCG GCGCGCAACC GGCTGATTTC GCTGGCGCTG
CGACCGGCCC CGGTCACCGA CCAGTGGATC GAGGAAGGCC CGCGCCTTGG TCCGCTGGCC
CCCGCGACCG AACGCCTGAC CCTGATCGAG GCCGAACAGC CCGGCGAAGA GGCCGAGGCC
GTCGCGCTGA TCATCCGCGA GGCGGTCGAG CGCGGCCAGC CGGTGACGCT GATCGCCGCC
GACCGCATGC TGACCCGCCG CGTGCAATCG GCGCTGGATC GCTGGGGCAT CATTCCCGAC
GATTCCGCCG GCCAGCCCTT GCCGCTGACC GCGCCCGGCC TGTTCCTGCG CCATGTCGCC
GACCTTTTCG GCGCCGAGAT GATGCTGGAC GCGCTCTTGG TGCTGCTCAA GCATCCGGTC
ACCGCCACCG GCCTTGGCTC CGATTACCGG CGCGAGCATA ACCGCCATAC CCGCGATCTG
GAGCTGCATC TGCGCCGCAA TGGCCCGGCT TTTCCCGACG GCGCGGCCTT GCGGGAATGG
GCGGACCGGG GCGACGCCTC CAGCAAGCCC TGGGCGCTGT GGCTGGCCGG GCTTCTGGAC
CGCATCGTGC CACTGGCCCA GGACCGTGCC CCGCGCCCGC TGGCTGATCG GTTGCGCGAT
CTGCGGGCCT TGGCCGAGGA TCTGGCAGCC GGCCCGGGCG GCGATGCCGG TGCGTCCGAA
CTGTGGGCCA AGGCCTCGGG CGGCCTGGCG CGTTCGGTGC TGGACCATCT TGCCGCCCAT
GCGCATCTGG GCCACGACCT GCGGCCGGGC GAGTTCTGCG ACCTGCTTTA CGACGAATTG
CAGGGCCAGG CGGTGCGGCA GGACGTGGCC GCGCATCCGC TGGTGCGGTT TCGCGGCCCG
CGCGAGGCGC GCACCGAAGC CGTGGGTAAG GCCGCCGGGC TGGTGATCCT GTCGGGGTTG
AACGAGGGCG GCTGGCCGCA GGCGCTGCCG CCCGATCCGT GGCTGTCGCG CCCGATGCGG
CTGGCTGCCG GGCTGACCCT GCCCGAGCGC CGGGTGGGCC TTGCCGCGCA TGACTTCCAG
CAGGCCGTCG GCGCAGGCGC GGTGGTGCTG ACCCGCGCCC GTCGCGATGC CGAGGCCGAG
ACCATCCCCT CGCGCTGGCT GAACCGGCTG GTGAACCTGC TGGGCGGGTT GCCGGACCAG
CAGGGGCCGC AGGCGCTGGC CGAGATGCGC CGGCGCGGCC GATACTGGCT GGACCTGGCT
GAATTGCAGG CCCGGCCGCG GATACGCCTG GCGCCGGCGC CGCGCCCCTC GCCCATCCCG
CCGCCGCCCG CCCTGCGCGA GCTGTCGGTG ACCGAGGTCA GGACGCTGAT CCGCGACCCC
TATGCCGTCT ATGCCCGCCG GGTGCTGGGC CTGCGCGCGC TGGACCCGCT GCGCCCCGAG
CCGGATGCGG CCGAACGCGG CAACATGCTG CACCACATCA TGGACCGTTT CTTGCGGGGG
CTTCCCGACC TGCCCGAGAC GCCGCAGGCG ATGAAGGCGC GGCTGCTTGC CATTACCGAC
GAGGTGCTGG AGGCCGAGGT GCCCTGGCCC TCGGCGCGGC TGTTCTGGCG GGCGCGCATC
GCCGGCATCG CCGACCGGCT GATGGCGGAC GAGGCCGAAA GGCTGGCCCG CGGCACGCCC
ACCGTGGTCG AGGAATATGG CGAGCAGGGC ATTCCCGGCC TGGATTTCCG GCTGATCGCC
CGGCCCGACC GGCTGGACCG GCTGCATGAC GGCCAGGTGC ATGTCTATGA CTACAAGTCC
GGCAAGCCGC CGACCGACAA GCAGATCGCG CATTTCGACA AGCAGTTGCC GCTGGAGGCC
GCCATGGTCC GGCACGGTGC CTTCAGGACG CTGGGACCGG CCGAGGTCGA GGGCATCAGC
TATATCCAGC TTGGGGGTGA GGGCAGGACC GAACCCCGCG AATTCTCCGC CGGCTTCGCC
GAGGAGACCT GGGCCGGCTT CGTCACCCTG ATTCGCCGCT ATCTGGGCGG CGAGCGCGGC
TTTACCGCGC GGCTGGCCAT GGAGCGCAGC GATCACGCCA GCGATTACGA CCACCTGTCG
CGGCATGGCG AATGGGACAC GACCGAAACC CCGCAACCGC AAAGGTTCGG CGATGATGGA
TGA
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| Protein sequence | MPDWQNGVFA LPCGADFPGA FAEGLIRRMR HHPPQEMARV TVYANSGQSL MALRQALIQR
GPLLLPRLRL IADLGGGAAT TPLARRLELG RLIDAALRAQ PDLAQGQSVP ELAASLAGLM
AEMQLEGLDA QALDRIDASE HAQHWGRALA FLKIAAGYYL SDPPQDREAR QRAAAEALAA
AWARGEMLPQ GPVVVAGSTG SHGATRDFMR AVARLPMGAV VLPGFDADLP QGVWDGLDQR
SEDHPQARYA PLVAEFGAPA EWLADTAPDP ARNRLISLAL RPAPVTDQWI EEGPRLGPLA
PATERLTLIE AEQPGEEAEA VALIIREAVE RGQPVTLIAA DRMLTRRVQS ALDRWGIIPD
DSAGQPLPLT APGLFLRHVA DLFGAEMMLD ALLVLLKHPV TATGLGSDYR REHNRHTRDL
ELHLRRNGPA FPDGAALREW ADRGDASSKP WALWLAGLLD RIVPLAQDRA PRPLADRLRD
LRALAEDLAA GPGGDAGASE LWAKASGGLA RSVLDHLAAH AHLGHDLRPG EFCDLLYDEL
QGQAVRQDVA AHPLVRFRGP REARTEAVGK AAGLVILSGL NEGGWPQALP PDPWLSRPMR
LAAGLTLPER RVGLAAHDFQ QAVGAGAVVL TRARRDAEAE TIPSRWLNRL VNLLGGLPDQ
QGPQALAEMR RRGRYWLDLA ELQARPRIRL APAPRPSPIP PPPALRELSV TEVRTLIRDP
YAVYARRVLG LRALDPLRPE PDAAERGNML HHIMDRFLRG LPDLPETPQA MKARLLAITD
EVLEAEVPWP SARLFWRARI AGIADRLMAD EAERLARGTP TVVEEYGEQG IPGLDFRLIA
RPDRLDRLHD GQVHVYDYKS GKPPTDKQIA HFDKQLPLEA AMVRHGAFRT LGPAEVEGIS
YIQLGGEGRT EPREFSAGFA EETWAGFVTL IRRYLGGERG FTARLAMERS DHASDYDHLS
RHGEWDTTET PQPQRFGDDG
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