| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2791 |
|---|
| Symbol | |
|---|
| ID | 4581370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 2809962 |
|---|
| End bp | 2810516 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639770117 |
|---|
| Product | ATP-dependent protease peptidase subunit |
|---|
| Protein accession | YP_916571 |
|---|
| Protein GI | 119385515 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.622001 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAG ACAAATTTCC CGGCTGGCAC GGCACCACCA TCCTGGCCGT TCGGCGGGCC
GGCCGCGTGG TCGTCGCCGG GGACGGCCAG GTCAGCGTCG GCCAGACGGT GATGAAGGGC
ACGGCGCGCA AGGTGCGCCG GCTGAACCCC GGCGGACATG AGGTGGTGGT GGGCTTTGCC
GGCTCGACCG CCGATGCCTT CACCCTGCTG GAGCGGCTGG AGAAGAAGCT GGAGGCGGCG
CCCGGCCAGC TGGCGCGGGC CTGTGTCGAC CTGGCCAAGG ACTGGCGCAT GGACAAGTAT
CTGCGCAACC TGGAGGCCAT GCTGATCGTC ACCGACGGGC GCGACATCTT CGTGGTGACG
GGGGCCGGCG ACGTGCTGGA GCCCGAGCAT GACGTGGCCG CCATCGGCTC GGGCGGGAAT
TTCGCGCTGG CCGCGGCGCG CGGGCTGATG GAGAGCGACC TGGATGCCGA GGCCGTGGCG
CGCAAGGCCA TGGCGATCGC GGCGGATATC TGCGTCTATA CCAACGGGAA CCTGACCGTC
GAGGTTCTGG GGTAG
|
|---|
| Protein sequence | MSEDKFPGWH GTTILAVRRA GRVVVAGDGQ VSVGQTVMKG TARKVRRLNP GGHEVVVGFA
GSTADAFTLL ERLEKKLEAA PGQLARACVD LAKDWRMDKY LRNLEAMLIV TDGRDIFVVT
GAGDVLEPEH DVAAIGSGGN FALAAARGLM ESDLDAEAVA RKAMAIAADI CVYTNGNLTV
EVLG
|
|---|
| |