Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2781 |
Symbol | |
ID | 4581360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2802810 |
End bp | 2803358 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639770107 |
Product | two component Fis family transcriptional regulator |
Protein accession | YP_916561 |
Protein GI | 119385505 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.463044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGG ATTACCAAAT CGGCCCCGAC CCCAGCCTTC TGCTGGTCGA TGACGACGAG ATCTTTCTGA ACCGTCTGGC CCGTGCGATG GAAAAACGCG GCTTCGCCGT CACCCGCGCC GCCTCGGTCG CCGAGGCCCG CGCCGCGGTG GCCGAGCACG CGCCCGCCCA TGCGGTCGTC GACCTGCGGC TTGAGGATGG CAATGGGCTT GATGTGGTCG ATGCCCTGCG CGAGGCGCGC GAGGATACCC GGATCGTCGT CCTGACCGGC TATGGCGCCA TCGCGACGGC GGTGGCCGCG GTCAAGATGG GTGCGACGGA TTATCTGTCA AAGCCGGCGG ATGCCGATGA CGTGACCCGC GCGCTTCTGG CGCGGGGCGA CACATTGCCG CCCCCGCCGG AAACGCCGAT GTCGGCCGAC CGCGTGCGTT GGGAGCATAT CCAGCGCGTC TATGAGCAAT GCGACCGCAA TGTCAGCGAA ACGGCGCGGC GCCTGCATAT GCACCGACGG ACCTTGCAGC GGATTTTGGC CAAACGCAGC CCGCGTTAA
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Protein sequence | MAEDYQIGPD PSLLLVDDDE IFLNRLARAM EKRGFAVTRA ASVAEARAAV AEHAPAHAVV DLRLEDGNGL DVVDALREAR EDTRIVVLTG YGAIATAVAA VKMGATDYLS KPADADDVTR ALLARGDTLP PPPETPMSAD RVRWEHIQRV YEQCDRNVSE TARRLHMHRR TLQRILAKRS PR
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