Gene Pden_2781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2781 
Symbol 
ID4581360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2802810 
End bp2803358 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content67% 
IMG OID639770107 
Producttwo component Fis family transcriptional regulator 
Protein accessionYP_916561 
Protein GI119385505 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.463044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGG ATTACCAAAT CGGCCCCGAC CCCAGCCTTC TGCTGGTCGA TGACGACGAG 
ATCTTTCTGA ACCGTCTGGC CCGTGCGATG GAAAAACGCG GCTTCGCCGT CACCCGCGCC
GCCTCGGTCG CCGAGGCCCG CGCCGCGGTG GCCGAGCACG CGCCCGCCCA TGCGGTCGTC
GACCTGCGGC TTGAGGATGG CAATGGGCTT GATGTGGTCG ATGCCCTGCG CGAGGCGCGC
GAGGATACCC GGATCGTCGT CCTGACCGGC TATGGCGCCA TCGCGACGGC GGTGGCCGCG
GTCAAGATGG GTGCGACGGA TTATCTGTCA AAGCCGGCGG ATGCCGATGA CGTGACCCGC
GCGCTTCTGG CGCGGGGCGA CACATTGCCG CCCCCGCCGG AAACGCCGAT GTCGGCCGAC
CGCGTGCGTT GGGAGCATAT CCAGCGCGTC TATGAGCAAT GCGACCGCAA TGTCAGCGAA
ACGGCGCGGC GCCTGCATAT GCACCGACGG ACCTTGCAGC GGATTTTGGC CAAACGCAGC
CCGCGTTAA
 
Protein sequence
MAEDYQIGPD PSLLLVDDDE IFLNRLARAM EKRGFAVTRA ASVAEARAAV AEHAPAHAVV 
DLRLEDGNGL DVVDALREAR EDTRIVVLTG YGAIATAVAA VKMGATDYLS KPADADDVTR
ALLARGDTLP PPPETPMSAD RVRWEHIQRV YEQCDRNVSE TARRLHMHRR TLQRILAKRS
PR