| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2762 |
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| Symbol | |
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| ID | 4580397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2781594 |
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| End bp | 2782247 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639770088 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_916542 |
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| Protein GI | 119385486 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0716815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTGG ATGAGATCAG GCGCCGCATC AGCGCGGCCG AGACAGCTTC GGGGCGCGCG
GCGGGCGAGG TCACGCTGAT CGCCGTCAGC AAGGTGCAAC CCCCCGACCG GGTCGAAGCG
GTGCTGGACG CCGGCCAGCG CGTATTCGGC GAAAACTACG TGCAGGAGGC GGCGGGGAAA
TGGCCCGGCT GGCGCGAGCG TTTCGCCGGC ATCGAGTTGC ACATGATCGG CCCCTTGCAG
ACCAACAAGC TGAAGCCGGC GCTGGAGCTT TTCGACGCCA TCCATACGCT CGACCGTCCC
TCTCTGGCGA CGAAGCTGGC CCGGCAGGTG CAGGTGCGCG GGGCCTGCCC GCAGCTTTTC
GTGCAGGTGA ACACCGGCGC CGAGCCGCAA AAGGCCGGCA TCCTGCCCGA TGAGGCCGAT
GCCTTCATCG CCCAGTGCCG GGCGCTGGAT CTGGCGATCT CGGGCCTGAT GTGCATCCCG
CCCGAGGATC GCGATCCGGT GCCGCATTTC CGCGACCTGC GCGACATTGC CGCCCGCAAC
GGGCTTGCCG GCCTGTCGAT GGGCATGAGC GCGGATTTCG AAACCGCCAT CGCCGAGGGC
GCCACCCATG TCCGCATCGG CAGCGCGATC TTTGGCGCGC GCGATTACCG CTAG
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| Protein sequence | MGLDEIRRRI SAAETASGRA AGEVTLIAVS KVQPPDRVEA VLDAGQRVFG ENYVQEAAGK
WPGWRERFAG IELHMIGPLQ TNKLKPALEL FDAIHTLDRP SLATKLARQV QVRGACPQLF
VQVNTGAEPQ KAGILPDEAD AFIAQCRALD LAISGLMCIP PEDRDPVPHF RDLRDIAARN
GLAGLSMGMS ADFETAIAEG ATHVRIGSAI FGARDYR
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