Gene Pden_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2752 
Symbol 
ID4580387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2771095 
End bp2771817 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content72% 
IMG OID639770078 
ProductGntR family transcriptional regulator 
Protein accessionYP_916532 
Protein GI119385476 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.868488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCCG CATCGACCGA AGCCCTATCC GCCACGGGCG GGCAAGCGCC CTTCGCGGCG 
CAATTGCACG CCCGCCTGCG CCAGCGCATC ATCCGCGGCG AACTGCCGCC CGGCACGCGC
CTCTCCGAAC AGGAGATCGC CGACCAATGC GCCCTGTCGC GCCAGCCGGT GCGCGAAGCC
TTCATCCGCC TTGCCGGAGA GGGGCTGCTG GAGGTCCGGC CGCAGCGCGG CACCTTCGTC
ACCCGCATCG ACATGGAATG GGTGCTCTGC ACGCGCTTCA TCCGCGAATC GGTCGAATCC
GACATCGCGC GCCTGGCCGC CGCCCGCGCG CAACCGCAGG ACCGCGAGGC GCTGTCCCGC
CAGATCGCCC GGCAGGAGGC CGAGACCGAG CCGGCGGCAC TGGCGCAGCT GGACGAGGAA
TTCCACGCCA CCCTGGCAGG GATCGCCGGC AAGGCGATGG TCTGGAACCA CCTGCACCAG
ATGAAGATGC ATCTCGACCG CGCCCGCCAC CTGCTGACGG CGATGACGCC CAAGGACACC
ATGCTGGCCC AGCACCGCGA CGTGGCCGAG GCCATCGCCG CGGGCGACCC CGACCGCGCC
GAGGCCGCCA TCCGCCAGCA CCTGCGCCGC GTTCTGCTGG ACCTGCCGGG GGTGCTGCGG
CTGTCGCCGG ACTACTTCAC CAAGACCGAC ACGCTGGCGG AAACGCTGGC CGCCGAAGCC
TGA
 
Protein sequence
MDPASTEALS ATGGQAPFAA QLHARLRQRI IRGELPPGTR LSEQEIADQC ALSRQPVREA 
FIRLAGEGLL EVRPQRGTFV TRIDMEWVLC TRFIRESVES DIARLAAARA QPQDREALSR
QIARQEAETE PAALAQLDEE FHATLAGIAG KAMVWNHLHQ MKMHLDRARH LLTAMTPKDT
MLAQHRDVAE AIAAGDPDRA EAAIRQHLRR VLLDLPGVLR LSPDYFTKTD TLAETLAAEA