| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2720 |
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| Symbol | |
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| ID | 4580355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2737230 |
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| End bp | 2738837 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639770046 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_916500 |
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| Protein GI | 119385444 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.314092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.796536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGTA AACGACCGGC TCACCCCCGA TCACGGATTC GCCAGCGGGC CCGGCCTTCA
CCGTTCTCCA AATACTCAGC CGACCGCGCG CAGGGGCCCG GCATCTCAGA AATCGACGCA
GATGCCCTTT TTCTCGTAAT CGCCATAGCG CACCGGCTCG GGCCCGTCGC GCCCGCCCAG
TTCGACCGGC AGGTCCAGCG GCTTCGCCTT GCGGCGGCGC TCTTCGGCCT CGGCCAGCGC
GCGCTGTGCG GCGGGCGGCA GATCCTTGCG GTCGGTCATG GCGGTTTCCC CTGCTTCGCG
CTAGACGAAG TCAATCTAGG CAAGAGGCAG GCTTTGAACA AGACGCGCAC GCAGGGACAG
GCAAGGGACG GGGCAAGATC GGGTGCGCTG CGCCTGCTGG CCGCGGTCGA CGATGGCGCG
ACGCTGGACG AGGCCGGCGC GCTGACCGAC CGCCTTGCCC CCGCCGAACG GGCCCGCGCC
CGCCGGCTGG CGCTGGAGGT CCTGCGCAGG GCCGATCGGG TCGACCTGCT GCTGGCGCCG
ATGCTGGCCC GTCGCCCGCG GCCCGAGATC ATGCGCATCC TGCGGCTCGC CGCGGTCGAG
ATGCTGGCCC TGGGCGAGGC GCCGCATGGC GCGGTCAATG CCGCCGTGGC GCTGGCCCGC
GCCTCGGGGC GCAAGGGGCA GGCCGCGGCC GGCATGGTGA ACGCGGTGCT GCGCAAGATC
GCCGGCGCCG CCGAGGCCTG GGCACGGCTT TCGCCGCAGA AGATGCCGTT CTGGCTGCGC
GCCCCGGTCG TGGCCGCCTG GGGCGAGGAT GCCGCCCGCG CCATCGAGGC CGCGCATGAG
GCCGGCGCGG TCCTGGACCT GACGCCCAAG GGCGCGGATT GCCCGGGCGA GGCGCTGCCC
ACCGGCTCGC ACCGGCTGCC CGCCGGCACC CGGGTCTCGG CGCTGCCGGG CTATGCGGAG
GGCGACTGGT GGGTGCAGGA CGCGGCGGCG GCGCTGGCGG TCCGGGTGCT CGATCCGCAG
CCGGGCGAGC GGGTCGCCGA CCTTTGCGCC GCGCCGGGCG GCAAGACGCT GCAACTGGCC
GCAGCCGGGG CCGAGGTGAC GGCGGTGGAC ATTTCCGAGC TGCGCCTTGC CCGCGTGGCC
GAGAACCTGG CGCGCTGCGG CCTCCAGGCC CGGCTGGTCG CGGCGGATGC GCTGGACTGG
CGGCCCGACC AGCCGCTGGA CGCGGTGCTG CTGGATGCGC CCTGTTCGGC CACCGGCACC
ATCCGCCGCC ATCCCGAACT GCCGCGTATC CGCGACGGCG CCGGCCTTGC CGAACTGACC
GGATTGCAGG CCCGGCTGAT CGACCATGCG CTGGACCTGC TGAAACCCGG CGGCCGGCTG
ATCTATGCCA CCTGCTCGCT CCTGCCCGCC GAGGGCGAGG ATCAGCTTGC CGCCGTTCTT
GCCCGCCATC CCGGCCTGGT GGTCGAGCCG CCCCGCGCGC CCGGCGTCGA GCCGGACTGG
ATCACGCCTC AGGGCGGGCT GCGGCTGCGC CCGGATCTGT GGCCGGAACG CGGCGGTATG
GACGGGTTCT TCATCGCGCG CTTGCGAAAA TCCGCCGAGC GGACCTAA
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| Protein sequence | MASKRPAHPR SRIRQRARPS PFSKYSADRA QGPGISEIDA DALFLVIAIA HRLGPVAPAQ
FDRQVQRLRL AAALFGLGQR ALCGGRQILA VGHGGFPCFA LDEVNLGKRQ ALNKTRTQGQ
ARDGARSGAL RLLAAVDDGA TLDEAGALTD RLAPAERARA RRLALEVLRR ADRVDLLLAP
MLARRPRPEI MRILRLAAVE MLALGEAPHG AVNAAVALAR ASGRKGQAAA GMVNAVLRKI
AGAAEAWARL SPQKMPFWLR APVVAAWGED AARAIEAAHE AGAVLDLTPK GADCPGEALP
TGSHRLPAGT RVSALPGYAE GDWWVQDAAA ALAVRVLDPQ PGERVADLCA APGGKTLQLA
AAGAEVTAVD ISELRLARVA ENLARCGLQA RLVAADALDW RPDQPLDAVL LDAPCSATGT
IRRHPELPRI RDGAGLAELT GLQARLIDHA LDLLKPGGRL IYATCSLLPA EGEDQLAAVL
ARHPGLVVEP PRAPGVEPDW ITPQGGLRLR PDLWPERGGM DGFFIARLRK SAERT
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