Gene Pden_2697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2697 
SymbolflgK 
ID4581242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2713983 
End bp2715443 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content62% 
IMG OID639770026 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_916480 
Protein GI119385424 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTT CGTCCGCCAT CTCCAACGCC GTTTCGGGCC TGACCGCAGC CTCGCGGGGC 
ATCGAGATCG TATCCTCCAA TATCGCAAAC GCCCTGACGC CCGGCCATGC GCGCCGGGAA
CTCGACCTGT CGTCGCGCCC GTCCGAGCAC GGTGGCGGCG TAAACATCGA TGGTGTCAGC
CGGATATTCA CCGCCGGACT GATTGCAGAC AATCGGCTGG CCGAGGCGGG TGTCGGCTCG
TCCCGAACCG TCGCCGCATT CCACGCGGCC ATGGAAAAAG CCTTCGGCAC CGGGACCGGG
ATCTCCTCGC TCGGGCAAAG CCTGACGGAT TTCGAATCCG CCCTGACCAG TGCGGCATCA
CGACCCGACA GCGATATGCG CCTATCGAAT GTGCTCGACA CCGCCACCGC CTTGGCAAAG
AAGATCAACG ACATATCCAC AACGATCCAG GCGGAGCGCA GCAAGGCCGA ACAGGCCATC
GAAAGCGACG TTTCACGGCT CAATGCGGCG TTGCAGCAGG TGGCGAAACT GAATGCACAG
ATCGTTACGA TCACAGCGCA GAGCAAGGAT GCTTCCTCGC TGGTCGATGC CCGCCAGGCG
GCGATAGACG GTATCTCGGA TATCCTGCCG ATCAAGGAGG TGCCGCGCGA GAACGGCAGG
ATCGCCCTGT TCACACCCGA CGGAGCCATT CTGCTGGACG GAACCGAGCC GGCGAGGATC
GAGTTCAGCG CCGTCCCTGG CATCACCGCC GAGATGTCCA TCGGCAGCAG TGCCCTTTCT
GCGTTGACCC TCAACGGCAA GCCGCTTACC GGCCCGCAGC AGCAGACCAT GCTGAGCGGC
GGAAGCCTGG GTGCGAATTT CGCCATTCGC GACCAGATCG CTCCTGCCTA TCAGCAGCAG
ATCGACGCTT TCGCCCGCGA TTTGTATGAC CGGCTGTCCG ATCCCATGAT CGACTCTTCC
CTGAATACCG GCGGCCCGGG ACTGTTCACG GATGCACAAG GCGCCTTCGA CCCCGCCAAC
GAATCCGGTT TCGCTGGCCG TATCGCCGTA ACTTTCCTGG TGAGCCCTGA GACGGGCGGA
CAGCTGTGGC GGATTCGCGC CGGTATCAAC GCGCCCGACC CCGGCAATTC GGGGGAAAGC
GCATTGCTTG ACCGTCTAAG CTCGGCAATC TCGGCCTCGC GCTTTCCGGC TTCCGCCCAT
CTTTCCAACG CACCGCGTAG CTTGCAGACA CTTTCCGCAG AGCTGTCTTC GGGCGCAGCC
ACGAATCGCA TTCGTTCCGA AGCCAGCGCG CTGCAAAGCA GCTCGCACCA GTCCGGTCTC
AAGGCGGCCC TCCTCGCAGA AGGGGTCGAC AGCGACAAGG AAATGGAAAG CCTGCTCGCC
CTGGAGCGCG CCTATGCCGC CAATGCCAAG GTCTTTCAGA CCGCAAACGA TATGCTCGAC
GCTATTCTGA GGCTGACATG A
 
Protein sequence
MSISSAISNA VSGLTAASRG IEIVSSNIAN ALTPGHARRE LDLSSRPSEH GGGVNIDGVS 
RIFTAGLIAD NRLAEAGVGS SRTVAAFHAA MEKAFGTGTG ISSLGQSLTD FESALTSAAS
RPDSDMRLSN VLDTATALAK KINDISTTIQ AERSKAEQAI ESDVSRLNAA LQQVAKLNAQ
IVTITAQSKD ASSLVDARQA AIDGISDILP IKEVPRENGR IALFTPDGAI LLDGTEPARI
EFSAVPGITA EMSIGSSALS ALTLNGKPLT GPQQQTMLSG GSLGANFAIR DQIAPAYQQQ
IDAFARDLYD RLSDPMIDSS LNTGGPGLFT DAQGAFDPAN ESGFAGRIAV TFLVSPETGG
QLWRIRAGIN APDPGNSGES ALLDRLSSAI SASRFPASAH LSNAPRSLQT LSAELSSGAA
TNRIRSEASA LQSSSHQSGL KAALLAEGVD SDKEMESLLA LERAYAANAK VFQTANDMLD
AILRLT