Gene Pden_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2672 
Symbol 
ID4581217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2682975 
End bp2684168 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content69% 
IMG OID639770001 
Productaminotransferase, class I and II 
Protein accessionYP_916455 
Protein GI119385399 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTC CCGAGCGGTT CTCGAACCTG CCGGATTACG CATTTCCGCG CCTGCGGAAA 
CTGCTCGCGG GCATCGAGCC CGGGGGCGAT CCCCTGATCC TGACCATCGG CGAGCCGCGC
CATGCGCTGC CGGATTTCGT CGGCCCGGTC ATGGCCGAAA GCATCGCCGA TTTCGGCAAA
TACCCCTCGA ACGAGGGAAC GGCCGAACTG CTGGCCGCGA TCTCGGGCTG GCTCCAGCGC
CGGCACGGGC TGGATGTCGC GCCCGAGCGC ATCATGGCGC TGAACGGCAC GCGCGAGGGG
CTGTTCAACG CCGCCTTGGC ACTGGCGCCG GAACGCAAGA ACGGCCAGCA GCCCGCGATC
CTGATCCCGA ACCCGTTCTA TCAGGTCTAT GCGGTCGCCG CGGCGGCGGT GGGCGCCGAG
CCGGTCTTTG TCCCCGCCGT GCCGGAGACC GGCCACCTGC CGCGCTTTTC CGGCCTGCCG
GCCGAGGTGC TGGACCGTGC CACCGTGGCC TATCTGTGCT CGCCGGCCAA TCCGCAGGGC
AGCATCGCGT CGGAGGATTA CCTGGAAGAG CTGATCGCGC TGGCCGACCG GCACGATTTC
CTGATCTTCG CCGACGAGTG CTATTCCGAG ATCTGGCGCG ACACGCCGCC GCCGGGCGCG
CTGGCGGTGG CCACGCGCAT GGGCCTGCCC GACCGGGTGG TGATGTTCAA CTCGCTGTCG
AAGCGCTCGA ACCTGCCGGG GTTGCGTTCG GGCTTTGCGG CAGGCGGCGC GGCGCAGATC
GCCCAGTTGC GGCAATTGCG CAACTATGCC GGCGCACCGC TGCCGCTGCC GGTGCAGCGC
GTCAGCACCA TGGCCTGGAC GGACGAGGCG CATGTGGATG CAAGCCGTGC GCTTTACCAG
CAGAAATACG CCATCGCCGA CCGGGTGCTG GGCAACGTGC CGGGCTATCA GCCGGTGCAG
GGCGGCTTTT TCCTGTGGCT GCCGGTGCCC GAGAGCGTCG GCGACAGCGA GGACGCCGCC
AAGAAGCTGT GGGCCGAGGC CGGAATCCAG GTGCTGCCCG GCGCCTATCT GGCCCGCGAC
ACGGCCGGCG GCAATCCGGG CCGGAATTTC ATCCGCGTGG CGCTGGTCGC AGCGGCGGAC
CAGACCGAGG CGGCCCTGAA CCGCCTGAAA AACTGTTTGT ATCAAGGGGG TTGA
 
Protein sequence
MAIPERFSNL PDYAFPRLRK LLAGIEPGGD PLILTIGEPR HALPDFVGPV MAESIADFGK 
YPSNEGTAEL LAAISGWLQR RHGLDVAPER IMALNGTREG LFNAALALAP ERKNGQQPAI
LIPNPFYQVY AVAAAAVGAE PVFVPAVPET GHLPRFSGLP AEVLDRATVA YLCSPANPQG
SIASEDYLEE LIALADRHDF LIFADECYSE IWRDTPPPGA LAVATRMGLP DRVVMFNSLS
KRSNLPGLRS GFAAGGAAQI AQLRQLRNYA GAPLPLPVQR VSTMAWTDEA HVDASRALYQ
QKYAIADRVL GNVPGYQPVQ GGFFLWLPVP ESVGDSEDAA KKLWAEAGIQ VLPGAYLARD
TAGGNPGRNF IRVALVAAAD QTEAALNRLK NCLYQGG