Gene Pden_2663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2663 
Symbol 
ID4581208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2674609 
End bp2675790 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content69% 
IMG OID639769992 
Productbeta-ketothiolase 
Protein accessionYP_916446 
Protein GI119385390 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.574059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGA ACGAAATCGT CATCCTGTCG GGGGCGCGCA CGGCCATCGG CACCTTCGGC 
GGCAGCCTCG CGGGGGTGCC TCCGATCCAG CTTGCCGCGA CGGTCACCCG TGCGGCGATC
GAGCGCGCGG GGATCGGCCC CGAGCGCATC GGCACCGTGG TCTTCGGCCA TGTGCTGAAC
ACCGAGCCGC GCGACATGTA TCTGTCGCGC GTGGCGATGC TGGACGCCGG CGTGCCCGAT
ACCACGCCGG CGATGAACGT GAACAGGCTC TGCGGTTCGG GGGCGCAGGC CATCGTCTCG
GCCACGCAGG CGCTGATACT GGGGGATGCC GACTTTGCCG TGGCGGGCGG TGCGGAATCG
ATGAGCCGCG CGCCCTATGC CGTGCCGGCG GCCCGGTTCG GCGCCAAGAT GGGCGACGTG
CAGATGCTCG ACATGATGGT CGGCGCGCTG ACCTGCCCGA TGGGCACCGG CCATATGGGC
GTGACGGCCG AGAATGTTGC GCGCGAACAT GACATCTCAC GCCAGGCGCA GGACGAATTC
GCGCTGGAAA GCCAGAAGCG CGCTGCGGCC GCCATCGCCG AGGGCCGCTT CAAGGAGCAG
ATCGTTCCCA TCGAGATCAA GACCCGCAAG GGCATGGTGG CCTTCGATAC CGACGAGCAC
CCGAAAGCGA CCGATCTGGA GAAGCTGGCG GGACTGAAGG CGGTTTTCCA GAAGGATGGC
ACGGTCACCG CCGGCAACGC CTCGGGCATC AACGACGGCG CGGCGGCTCT GGTGCTGGCG
CGCGCGGACG CGGCCAGGGC GGCGGGCGCC AAGCCGCTGT TCCGGGTGCT CGGCTATGCC
GTGGCGGGCG TGCGTCCCGA GGTCATGGGC ATCGGCCCGG TCCCGGCGGT CGAGGCGTTG
CTCAAGAGCA CCGGCCTGAA GATCGGCGAG TTCGACGTGA TCGAGTCGAA CGAGGCTTTC
GCCGCGCAGG CTTTGGCGGT GAACAAGGGG CTCGGCCTCG ATCCGGCGAA GGTGAACCCG
AACGGCGGCG CCATCGCCTT GGGCCATCCG GTCGGCGCGA CCGGCGCCCT CGTCACGGTC
AAGGCGATGT ATGAATTGAT GCGGACCGGC GGCAGCAAGG GGCTGATCAC CATGTGCATC
GGCGGCGGCC AGGGCATCGC GCTGGCTATC GAGCGCATCT GA
 
Protein sequence
MSENEIVILS GARTAIGTFG GSLAGVPPIQ LAATVTRAAI ERAGIGPERI GTVVFGHVLN 
TEPRDMYLSR VAMLDAGVPD TTPAMNVNRL CGSGAQAIVS ATQALILGDA DFAVAGGAES
MSRAPYAVPA ARFGAKMGDV QMLDMMVGAL TCPMGTGHMG VTAENVAREH DISRQAQDEF
ALESQKRAAA AIAEGRFKEQ IVPIEIKTRK GMVAFDTDEH PKATDLEKLA GLKAVFQKDG
TVTAGNASGI NDGAAALVLA RADAARAAGA KPLFRVLGYA VAGVRPEVMG IGPVPAVEAL
LKSTGLKIGE FDVIESNEAF AAQALAVNKG LGLDPAKVNP NGGAIALGHP VGATGALVTV
KAMYELMRTG GSKGLITMCI GGGQGIALAI ERI