Gene Pden_2603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2603 
Symbol 
ID4580702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2615882 
End bp2616346 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content68% 
IMG OID639769932 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_916386 
Protein GI119385330 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.639996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCA GCGACATTCT CTCCCCCGCC GCCGTGCGGA CGATGAGCCA GACCACCAGC 
AAGAAACGGT TGTTCCAGGA AATCGCCGAA CAGGCCCGGG CGGTCTATGG CGTGGACGCG
GCCCAGACGC TGGATGCGCT GCAGGAACGC GAAAGCCTGG GCCCCACAGG GGTTGGCCAT
GGCGTGGCGC TGCCCCACGC CCGGCTGCAC GGGCTCGACC ATGTGGTCGG CCTGTTCCTG
CGGCTGGAGA AGCCGCTGGA TTTCGACGCG GTGGATCGCC AGCCGGTGGA CCTGATCTTT
GCACTGCTGG CGCCCAAGAA TTCCGGCGTC GATCACCTCA AGGCGCTGGC GCTGGTGTCG
CGCACGCTGC GCGACCAGGA CCTGCGCGCC AAGCTGCGCG CCAACGAGGA CCCGGTGGCG
CTGCATGCCA TGCTGGCGGC CGCCCCCGGC ATCAAGGCAG CCTGA
 
Protein sequence
MQISDILSPA AVRTMSQTTS KKRLFQEIAE QARAVYGVDA AQTLDALQER ESLGPTGVGH 
GVALPHARLH GLDHVVGLFL RLEKPLDFDA VDRQPVDLIF ALLAPKNSGV DHLKALALVS
RTLRDQDLRA KLRANEDPVA LHAMLAAAPG IKAA