Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2510 |
Symbol | |
ID | 4580148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2529222 |
End bp | 2530475 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639769839 |
Product | lytic murein transglycosylase |
Protein accession | YP_916293 |
Protein GI | 119385237 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.577172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGAC GCATTTCCCG CATCGCGACC TCGGCCGTGC TGACCATCGC CCTGGCAGGC TGCGGCGTGT CGCTGAACCA CACGCCGGGC ACCGTCGGCG GCGGCAATTT CGGCGGATTG CCCACGGCGG GCGGGCAGGG CTCCGAGGCG GGCTTCCAGA ACTGGGTGCA AAGCTTCCGC CCGCGCGCGC TGGCGGCCGG TGTCTCGCCC GGCACGTTCG ACAGCGCCAT GGCCGGGGCG CACTACCAGC CCAGCATCGT CGCGCTGGAC CGCAAGCAAA GCGAATTCAC CAAGCCGATC TGGGAATATC TCGACGGTGC CATCGGCACG CGCGGGGCAA CCGGCCGTGC CAAGGCCGCG CAATATGCCG GCACGCTCTC GGCCATCGAG GCGCGCTACG GCGTCCCGCG CGAGATCGTG CTGGCGGTCT GGGGCATGGA ATCGAATTTT GGCGCCAATC GCGGCAACAC CCGGATCGTG CCGGCGCTGG CGACGCTGGC CTATGACGGT CGCCGCGGCG AATTCTTTGC CGGCGAGCTG GTGGCGGCGC TGCGCATCAT CCAGTCCGGC GATGTGGACA GCGCCCATAT GGTCGGCAGT TGGGCCGGGG CCATGGGGCA TACGCAATTC ATGCCGTCGT CCTTCCTCAG CCATGCCGTG GACTTCAACG GCGACGGCCG TCGCGACATC TGGTCGAACG ATCCGACCGA TGCACTGGCC TCGACCGCCA GCTACCTGCG CCAGAACGGC TGGCGCCCCG GCCAGCCCTG GGGAGCCGAG GTGATCCTGC CGCCGGGCTT CGACTTCAAC CGGTCCGGCA AGTCGGTGCA GCATTCAGGC AGCCAATGGG CGGCGATGGG GGTGCGCACG GTCAGCGGCG CGCCGGTGCC CTCGGGCTCC ATCCTGGCCC CGGCGGGGGC GCGGGGTCCG GCCTTTCTCA TCACCGACAA CTTCCGCGCC ATCCTGAAAT ACAACGCCTC CGACAGCTAT GCCCTGGCCG TCGCCTATCT GGGCGAGGCC ATCGCCGGCC GCCGCGGCAT CCAGGGCAAC TGGCCGCGCG GCGACCGCAC GCTGTCGAAC AACGAAAAGG CCGAGATCCA GCGCCTGCTG ATGGCGCGCG GCTTCGATAC CGGCGGGGTG GACGGCAAGC TGGGCGGCCA ATCGACCGAG GCGATCCGGG CCTTCCAGCG CTCGCGCGGC GTGACGCCCG ACGGCTATGC CGATACCCGC CTGCTGGCCA TGCTGCGCGG CTAA
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Protein sequence | MTRRISRIAT SAVLTIALAG CGVSLNHTPG TVGGGNFGGL PTAGGQGSEA GFQNWVQSFR PRALAAGVSP GTFDSAMAGA HYQPSIVALD RKQSEFTKPI WEYLDGAIGT RGATGRAKAA QYAGTLSAIE ARYGVPREIV LAVWGMESNF GANRGNTRIV PALATLAYDG RRGEFFAGEL VAALRIIQSG DVDSAHMVGS WAGAMGHTQF MPSSFLSHAV DFNGDGRRDI WSNDPTDALA STASYLRQNG WRPGQPWGAE VILPPGFDFN RSGKSVQHSG SQWAAMGVRT VSGAPVPSGS ILAPAGARGP AFLITDNFRA ILKYNASDSY ALAVAYLGEA IAGRRGIQGN WPRGDRTLSN NEKAEIQRLL MARGFDTGGV DGKLGGQSTE AIRAFQRSRG VTPDGYADTR LLAMLRG
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