| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2472 |
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| Symbol | |
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| ID | 4580110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2488422 |
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| End bp | 2489681 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639769801 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_916255 |
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| Protein GI | 119385199 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.250047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA CCATCCGCCT GGCACTGCTG ACCAGCACCC TGCTGACCGG CGCCGCCTGG
GCCCAGGACG TCACGCTGAC CATCGAGAGC TGGCGCAACG ACGACCTCGC CATCTGGCAG
GAAAAGATCA TCCCGGCCTT CGAGGCCGCC AATCCCGGCA TCAAGATCAA TTTCGCGCCC
TCGGCGCCGC CGGAATACAA CGCGGTGCTG AACTCCAAGC TGGATGCGGG CTCGGCCGGC
GACCTGATCA CCTGCCGGCC CTTCGACGCC TCGCTGGAAC TGTTCAAGAA GGGCAAGCTG
GCCGATCTGA GCGACCTGGC GGCGATGGCC AATTTCTCGG ACGTGGCCAA ATCGGCCTGG
CAGACCGATG ACGGCGCCCA GACCTTCTGC GTGCCGATGG CCTCGGTGAT CCATGGCTTC
ATCTACAACA AGACCGCCTT CGACGAACTG GGCCTGACCC CGCCCAGGAC CGAGGCGGAG
TTCTTTGCGC TGCTCGACAA GATCAAGGAA GACGGCACCT ATATCCCGAT GGCCATGGGC
ACGGCCGACC AGTGGGAAGC GGCGACCATG GGCTATCAGA ACATCGGCCC GAACTACTGG
CATGGCGAGG AGGGCCGCAA GGCATTGATC GAGGGCACGT CGAGCCTGAC CGACGATGGC
TGGGTCGCGC CCTTCCGCCA ACTGGCGAAG TGGAAGGACT ACCTGGGCGA CGGGTTCGAG
GCGCAGACCT ATCCCGACAG CCAGAACCTG TTCACGCTGG GTCGCGCCGC GATCTATCCG
GCTGGCTCGT GGGAGATCGG CGTCTTCGGC CCGCAGATCG GCGGCGCCTT CGAGATGGGT
GCCTTCCCGC CGCCCGTCCC GGCCGAGGGC GACACCTGCT ATATCAGCGA CCATACCGAT
ATCGCGCTGG GCATGAATGC CGCGACGAAG CACCCGGAAG AGGCGCGAAA ATTCCTGGAA
TGGGTCGGCT CGTCGGAATT CGCCTCGCTT TACGCCAATG CGCTGCCGGG CTTCTTCTCG
CTGAACTCGG CCCCGGTCGA GATGGAGGAT CCGCTGGCCA GGGAATTCGT CGGCTGGCGC
GAGACCTGTG AGCCCACCAT CCGCTCGACC TACCAGATCC TGTCGCGCGG CACGCCGAAC
CTGGAGAACG AGACCTGGAC CGCCTCGGCC AACGTGATCA CCGGCGCCGA GACGCCCGAG
GCCGCGGCCG AGAGGCTGCA ACAGGGCCTG GCCGCGTGGC ACGCGCCGCA GCAGAAGTGA
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| Protein sequence | MTKTIRLALL TSTLLTGAAW AQDVTLTIES WRNDDLAIWQ EKIIPAFEAA NPGIKINFAP
SAPPEYNAVL NSKLDAGSAG DLITCRPFDA SLELFKKGKL ADLSDLAAMA NFSDVAKSAW
QTDDGAQTFC VPMASVIHGF IYNKTAFDEL GLTPPRTEAE FFALLDKIKE DGTYIPMAMG
TADQWEAATM GYQNIGPNYW HGEEGRKALI EGTSSLTDDG WVAPFRQLAK WKDYLGDGFE
AQTYPDSQNL FTLGRAAIYP AGSWEIGVFG PQIGGAFEMG AFPPPVPAEG DTCYISDHTD
IALGMNAATK HPEEARKFLE WVGSSEFASL YANALPGFFS LNSAPVEMED PLAREFVGWR
ETCEPTIRST YQILSRGTPN LENETWTASA NVITGAETPE AAAERLQQGL AAWHAPQQK
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