| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2455 |
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| Symbol | |
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| ID | 4580788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2463608 |
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| End bp | 2465959 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639769784 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_916238 |
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| Protein GI | 119385182 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0279877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.549341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCG CCCGCGAGAT CACCGTCGCC ATCCCCGCCA TCGGCGAGCC CGTCACCTTC
GAGCGCATGG AGGGCGAGGA ACAGGTCTCG GCCCCCTTCG CCTTCGAGCT GCGCTTCTCG
GCCAGGACGC TGGACCTCAA GCCGGCCGAT CTGCTGGGCA CCCGCGCCAC CATTGCCGTC
AAGGGGGCCG AGGACAGCGA GCCGCGGCAT TTCGACGGCC ATGTCGCCGA GTTCGGCCTG
GCCGAGATCC GCGACGACTT CGCCTTTTAC CGGCTGCTTC TGCGCCCGGC GCTGTGGTTC
GCGAGCCTCG CGACCGACAA CCGCATCTTC CAGAACCTTT CGGTGCCCGA CATCATCGAG
GAGGTGCTGC GCGCCTATCC CGACGTGGTG CTGGACAAGC GGCTGGAGGG CAGCTACCCG
CCGCGCGACT ATTGCGTCCA GTTCGAGGAA AGCGACCTCG ACTTCCTTCA GCGGCTGATG
GAGGAGGAGG GGATCTTCTA TTTCTTCGAG CATGGCGAGG ACGGCCATGT CACCGTGCTG
GCCGATGCCA ATGCGGCGAT GAAGCCCGTG CCGGGCGCCG AAGAGATCGC CTATGAGCCC
GACAGCCCCA GCGCGCCGCG CGAAGGCGAC TACCTGACCG GCTGGGTGCC GCGCGCCTCG
GTGCGGATCG GGGGTTTTGC GCAGACCGAT TACGATTTCC TCAAGCCATC CTCGGACCTG
ATGGCGACGG CGAGCCGGCC CGAGGGCCAT GCCGGCGACC GGCGCGAGGC TTACCTTTAT
CCCGGCCGCC ATCTGGAGCT GGGGCGCGGC GACCGTCTGG CCGGCATCCG GCTGGAAGAG
GCGCAGGCCG CCTTCGAGCG CGTCGCGGCC GAGGGCACCG CCCGTCCGCC GGGACCGGGG
CGCAGCTTCA CCCTGACGGG TTTCCCGCGC GAGGCCGAGA ACGACCGCCA TCTGGTGCTG
TCCGCCCGCT ATCGCATGTG GGACGATCAG GTCCGCGCCG GCCAGCGCGC CGGGCAGGAG
GGGCGCGATC CGCTGGGCTA TCACGTCCGG CTGGTCTGCG CCCCGGCCCG CATCCCCTTT
CGCCCCGAGC GCCGTACGCC GCGCCGGCCG ATGCGCGGGC CGCAGACCGC CGTGGTGGTG
GGGCCGGCGG GGGCCGAGAT CTATACCGAC GAGCATGCGC GGGTGAAGGT GCAGTTCTTC
TGGGACCGCA AGGGCCGGCG CGACGCGCAT TCCAGTTGCT TCGTCCGCGT CAGCCAGACC
TGGGCCGGGG CGGGCTGGGG CTTCATCCAG ATCCCCCGCA TCGGGCAGGA GGTGATCGTC
GATTTCCTGG ACGGCGATGC CGACCGGCCC ATCGTCACCG GCCGGGTCTA CAATGCCGAG
CAGGTGCCGC CCTATGGCCT GCCCGGCAAT GCCACGCAAT CGGGCTGGAA ATCCAACAGC
TCGCCCGGCG GCGGCGGCTG GAACGAGCTG CGCTTCGAGG ACAAGGCCGG CGCCGAGGAG
GTGTATTTCC AGGCGCAGAA GGACCATAAC GAGCTGATCA AGAACGACGA GACCCGCCGC
ATCGGCCATG ACTGGATCGA GGATGTCGGC AACGACGCCA CCCAATCCAT CGGCAACGAC
CGCCGCGAAA GCGTGGGCCA CGACAAGTTC ACCACCATCG ACGCGAACCG CCAGGTCTCG
ATCGGGGTGG ACGATACGGA AAAGGTCGGC GGCCATCGCA GCCTGGACGT GGGCGCCACC
GAGACGATCC ATGTGGCCGC CAGTTCCACC GAGGCCATCG ACGGTGCGCA TAGCCAGACC
GTCGGCGGCG TGCAGACCAT CACCGTCAAG GCGGCGCGGG TGGACAGCGT GGCCGCGACC
GAGACGCGCA ATGTCGGCGC GGCGCAGACC AATACCATCG TCGGCGCGCG CGCCGTGACG
GTGCTGGCCG GGCAGAACCA TGCGATCACC TCGGACGACG GCTGGAAGGT GGGCGGCAAC
CGCTCGACCA ACGTGGCGGG GAACGAAACC GTGGAGGTCG CCGGCAACCG CAGCCACAAG
GCGGGCGGCA ACCGGGTCGA GAAGATCAGC GGCGATTCGA CGCTGGACGT CGCCGGCAAG
CGAGGCACCA CGGTCGGCGC GGACGAGTTG CACAAGGTCG GCGGCAAGAT GGCCCTGGAC
GTGGGCGCGG CGCTGGCCAT CGTGGCGGCG GATTCGATCT CGCTGACCTG CGGCTCGGCC
GCCATCGTGC TGAAAAAGGA CGGCACCATC ACCATCGAGG GCAAGGACAT CATGATCAAG
GGCTCGGGCA AGATCGACGT GAAGGCGTCG GGCGAAACCT CGGTCAAGGG CTCCAAGGTC
AACCTGAACT GA
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| Protein sequence | MSSAREITVA IPAIGEPVTF ERMEGEEQVS APFAFELRFS ARTLDLKPAD LLGTRATIAV
KGAEDSEPRH FDGHVAEFGL AEIRDDFAFY RLLLRPALWF ASLATDNRIF QNLSVPDIIE
EVLRAYPDVV LDKRLEGSYP PRDYCVQFEE SDLDFLQRLM EEEGIFYFFE HGEDGHVTVL
ADANAAMKPV PGAEEIAYEP DSPSAPREGD YLTGWVPRAS VRIGGFAQTD YDFLKPSSDL
MATASRPEGH AGDRREAYLY PGRHLELGRG DRLAGIRLEE AQAAFERVAA EGTARPPGPG
RSFTLTGFPR EAENDRHLVL SARYRMWDDQ VRAGQRAGQE GRDPLGYHVR LVCAPARIPF
RPERRTPRRP MRGPQTAVVV GPAGAEIYTD EHARVKVQFF WDRKGRRDAH SSCFVRVSQT
WAGAGWGFIQ IPRIGQEVIV DFLDGDADRP IVTGRVYNAE QVPPYGLPGN ATQSGWKSNS
SPGGGGWNEL RFEDKAGAEE VYFQAQKDHN ELIKNDETRR IGHDWIEDVG NDATQSIGND
RRESVGHDKF TTIDANRQVS IGVDDTEKVG GHRSLDVGAT ETIHVAASST EAIDGAHSQT
VGGVQTITVK AARVDSVAAT ETRNVGAAQT NTIVGARAVT VLAGQNHAIT SDDGWKVGGN
RSTNVAGNET VEVAGNRSHK AGGNRVEKIS GDSTLDVAGK RGTTVGADEL HKVGGKMALD
VGAALAIVAA DSISLTCGSA AIVLKKDGTI TIEGKDIMIK GSGKIDVKAS GETSVKGSKV
NLN
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