| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2415 |
|---|
| Symbol | |
|---|
| ID | 4580749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 2420089 |
|---|
| End bp | 2420415 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639769744 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_916199 |
|---|
| Protein GI | 119385143 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.747648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.205429 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGCAAA AGCAAGTGGC GGAAAGAATC GGAGTTTCCA TGCAGCAACT CCAAAAATAT
GAAACCGCCG TAAACAGGAT TTCTGCGTCG CGGCTGGTTG AAATAGCGAA TGTCCTGCAG
GTGCCACCGG CTGAGCTGTT GGCTGCCACG GGCTGTTATG AGGCAGTGGG TATGGATCAG
TACAATCGGG CAGAAGCGCT CGTCGAGATA CTGAGTGGGG TATCCGACTC AACTCTTAAT
CTTCTGATGG CGATGCTGCA TCAGATTTCA AGCGAAAGGG AGAACTCCGG CACCGAGGTG
GGAATAAATT CGTCACCTCT TCAATAG
|
|---|
| Protein sequence | MSQKQVAERI GVSMQQLQKY ETAVNRISAS RLVEIANVLQ VPPAELLAAT GCYEAVGMDQ
YNRAEALVEI LSGVSDSTLN LLMAMLHQIS SERENSGTEV GINSSPLQ
|
|---|
| |