Gene Pden_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2372 
Symbol 
ID4579229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2371232 
End bp2372017 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID639769702 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_916158 
Protein GI119385102 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.681659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.847152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACCA TCGCCACCTG GAACATCAAT TCGGTCCGCC TGCGCGAGGC GCTGGTCGCC 
CGCTTCCTGA CCGAGGAAGC GCCGGACATC CTTTGCCTGC AAGAGACGAA AAGCCCAGTC
GAGAACATCC CCCTGGAGGC ATTCCGGGCG CTGGGCTACG ACCATTTCGT CGCGCGCGGG
CAAAAGGGCT ATAACGGCGT CGCCATCCTG TCGAAGCTGC CGATCGAGGA TGCGGGCGAC
CGCGATTATG CCGGGCTGGG CCATGCCCGC CATGTCGCCG CGCGGCTGGA GAACGGCGTC
ACCATCCACA ACTTCTACGT CCCGGCGGGC GGCGACATTC CCGATCGCGA GCAGAACGTC
AAGTTCGGCC AGAAGCTGGA TTTCCTGACC GAGATGCGCG ACGTCTTCCA TGCCGACCGG
CCCGCGCGCT CGATCATGGT GGGCGACCTG AACATCGCCC CGCGCGAGGA CGACGTCTGG
TCGCACAAGC AATTGCTGAA GATCGTCAGC CACACGCCCA TCGAGGTCGA GCATCTGGGC
GCCGCGCAGG ATGCCGGCAA ATGGGTGGAC ATCACCCGCA AGGACATTCC GCAGGGCCTG
CTTTACAGCT GGTGGAGCTA TCGCGCGCGG GACTGGGACG CGGCCGACAA GGGCCGGCGG
CTGGACCATA TCTGGGCCAC GCCAGATATC GCCAATGCGG GGCACAACAG CCGCATCCTG
CGGCCGCTGC GCGGCTGGCA GCAGCCCAGC GACCACGTTC CGGTGCTGGC CAGCTTCGAT
CTATGA
 
Protein sequence
MFTIATWNIN SVRLREALVA RFLTEEAPDI LCLQETKSPV ENIPLEAFRA LGYDHFVARG 
QKGYNGVAIL SKLPIEDAGD RDYAGLGHAR HVAARLENGV TIHNFYVPAG GDIPDREQNV
KFGQKLDFLT EMRDVFHADR PARSIMVGDL NIAPREDDVW SHKQLLKIVS HTPIEVEHLG
AAQDAGKWVD ITRKDIPQGL LYSWWSYRAR DWDAADKGRR LDHIWATPDI ANAGHNSRIL
RPLRGWQQPS DHVPVLASFD L