Gene Pden_2370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2370 
Symbol 
ID4579227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2369590 
End bp2370228 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID639769700 
Productpeptidase S16, lon domain-containing protein 
Protein accessionYP_916156 
Protein GI119385100 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.847152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCG GCATCGACCT GCCCGAGACC GTCCCGCTGT TCCCGCTGCC GGGCGCGGTC 
CTGATGCCCC GCACCCGCCT GCCGTTGCAG ATCTTCGAGC CGCGCTATCT GCAGATGGTC
GAGGACGTGC TGAAGACCCC CTCGCGGCTG ATCGGCATGA TCCAGCCGGC CGAGGGCGGG
CTGGACGCGC TGGCCCAGGT CGGCTGCGCG GGCCGGATCG TGGCCTTTTC CGAACTGGAC
GACGGTCGGC TGATGATCTC GCTCAAGGCG CGTTCGCGTT TCCGGCTGAA CGAGGTGCAG
CCCGGCTTTA CCCCCTATCT GCGCGGCCAG GTGAACTGGT CGGGCTATGA GACGGACCTG
GCTGTCCAGC CCGAGGAGGA TCCGCGTTTC GAGCGCAAGG GCTTCATGGC GCGGCTGGGT
CGCTATATGG AGCAGCGCAG CCTGTCCACC GACTGGGATG CCGCCGAGGC GTCCGAGGCC
GAGACGCTGG TCAATTCGCT GTCCATGCTG CTGCCCTTCG CCCCCGAGGA AAAGCAGGCC
CTGCTGGAGG CGCCGACGCT TGCCAAGCGC CGCGTGCTGC TGGAGGGGCT GCTGGAATAC
GCCCTGCACG GCGGCGACAA CGAGGAGACG ATCCAGTGA
 
Protein sequence
MARGIDLPET VPLFPLPGAV LMPRTRLPLQ IFEPRYLQMV EDVLKTPSRL IGMIQPAEGG 
LDALAQVGCA GRIVAFSELD DGRLMISLKA RSRFRLNEVQ PGFTPYLRGQ VNWSGYETDL
AVQPEEDPRF ERKGFMARLG RYMEQRSLST DWDAAEASEA ETLVNSLSML LPFAPEEKQA
LLEAPTLAKR RVLLEGLLEY ALHGGDNEET IQ