Gene Pden_2353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2353 
Symbol 
ID4579210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2349862 
End bp2351043 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content72% 
IMG OID639769683 
Producthypothetical protein 
Protein accessionYP_916139 
Protein GI119385083 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.18015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CCTTGCCCGA ACCCTGGCCC GGCGCACGGT CCGAGGCGCG GCCGGTCGTG 
CTGCCGCCCG CGCCCATCGC CGTCTCGGTG CCCGCCGCCG GCGCGGATAC CGCCCGGCGC
ATCGCCGATG CCATGGCGCC CTTGCGGCCG GCGCTGGTGC TGCTGTTCGG CATGCCGACC
GAGGGGCTGC CGGCATTGGG CGCTGCGCTG CGCGAGGTGC TGGGCGAGGG CTGCCGCGTC
GTCGGCTGTT CCTCGGTGGG CGAGATCGGC CCCCGCGGCT ATTGCGCGCA GACGGTGACG
GCGCTGGGAT TTCCCTCGGC CAGCTTCCGG GTCGGCGTCT GCGTGCTGCG CGACCAGGCG
CTGGTGCCGG TGTCGGAATG GATGTCCACC CTGCGCCGCT TTCACGCCGA TTTCCGCCCC
GACCTGCGCC GCTCCAGCTT TGGCGTGCTG CTGGCCGATG CGCTGGCCCG CCAGGAGGAC
GTGCTGACCG CGACGCTGGA TGCGGCGATC CCCGGCCTGC CGATCGTCGG CGGCTCCAGC
GCCGAGGGCA TGCGGTTCGG CCCGACCTGC CAGATGGTCG ACGGTGCGGA GCATCCCGGT
GCGGCGCTGT TTCTGCTGGT CGAGACCGAT CTGGCGGCGG CCGAGGTCTC GTTCCAGCAT
TTCAGCCCGA CCGACCGCCG TGCCGTGGTG ACGGCCGCCG ACCGCCACAA CCGCGTCATC
ATGGAGCTGA ACGGCGAGCC GGCGGCGCAG GAATACGCCC TGCTGGCGGG GATACCCGTC
GAGGCGCTGA CGCCGACGGA ATTCGCCCGC CACCCGCTGC TTTTGCGCAC CGGCAAGCGC
CACCACGTCC GCGCCATCCG CGCGATCACG CCCGAGGGCG GCTTGCAGCT TCTTTCGGGG
ATCGAGGCCG GCAACATCCT GACGCTGGGC CGGGCGATGG ACATGACGCG CGGCTTTGCC
GAGGCTCTGG ACGCGCTGCC GCGCCCGCCG CTGATGGTGC TGGGCTTCGA TTGCGTGCTG
CGGCGGCTGG CGCTGGAACG CGCCGGCATG GACGGGCAGA TGTCCGAACT GCTGGCACGC
TATCGTGTCG CAGGCTTCAA TACCTATGGC GAGCAGCACA GCGGCATGCA TGTGAACCAG
ACCTTCGTCG GCATGGCGCT GATGCCGCCC GAGCCGGGTT GA
 
Protein sequence
MSAALPEPWP GARSEARPVV LPPAPIAVSV PAAGADTARR IADAMAPLRP ALVLLFGMPT 
EGLPALGAAL REVLGEGCRV VGCSSVGEIG PRGYCAQTVT ALGFPSASFR VGVCVLRDQA
LVPVSEWMST LRRFHADFRP DLRRSSFGVL LADALARQED VLTATLDAAI PGLPIVGGSS
AEGMRFGPTC QMVDGAEHPG AALFLLVETD LAAAEVSFQH FSPTDRRAVV TAADRHNRVI
MELNGEPAAQ EYALLAGIPV EALTPTEFAR HPLLLRTGKR HHVRAIRAIT PEGGLQLLSG
IEAGNILTLG RAMDMTRGFA EALDALPRPP LMVLGFDCVL RRLALERAGM DGQMSELLAR
YRVAGFNTYG EQHSGMHVNQ TFVGMALMPP EPG