Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2344 |
Symbol | |
ID | 4579397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2339369 |
End bp | 2341567 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639769674 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_916131 |
Protein GI | 119385075 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.442895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCAG AACAGGCACA ACGGCACGAA TGGACGGTGA CGGGCATGGA TTGCGCGTCC TGCAGCGCCA AGGTGACACG GGCGGTCGAG CGGCTGCCCG GCGTAGGCGA GGTCCGCGTC GCGCTGATGG CCGAGCGGCT GTCGCTGACC CTGGAGCCCG GCACCACCGG CCGCGACGAG ATCGAGGGCG TGGTGCGCAA GCTGGGCTAC GGCATTGCGC CCAAGGGGCA GCAGGCGCCG CGCAGGAAAG CCTTGGTGCT GCCGGACGCG CCGCCGCCCT CGGCCGAAGC CGCGGCGCAG CCCTCCCGCC ACGACCATGA TGCCGGGGGC GAAAGCTGGT ATCGGACAGG CAAGGGCCGG CTGGTGATCC TGACCGGAGT GTTGCTGGCG GCGGCATGGG GCCTTGAGCT TCTGACCTCG ACCGAGACGG GCTATTGGGC CTTTCTCGCC GCTTGCCTGA TCGGTGTCGC CCCGGTTGCA AGGCGCGCCT GGGCCGCGCT GCGCATGGGC CAGCCCTTTA CCATCGAGGC GCTGATGACC ATGGCCGCCA TCGGCGCGTT GTTCATCGGC GCGGCGGAAG AGGCGGCGCT GGTGGTCTTT CTGTTCGCCC TGGGCGAGGT GCTGGAGGGC GTCGCCGCCG GCAAGGCCCG CGACGGCATC AGGGCTCTGG CCGATCTGGT GCCCAAGACC GCGCTGCTGG AGATCGACGG CGCCACCCGC GAGATTTCCG CCGACCGGCT GGAGATCGGC CAGACCGTGC TGGTCCGTCC CGGCGACCGC ATCCCCGCCG ACGGCGAGAT CGTCGACGGC ATCGGCGGCG TGGACGAAAG CCCGGTGACC GGCGAAAGCG TGCCCCGCAC CCGCGGGCCG GGCGAGCCGG TCTTTGCCGG CTCGATCAAT GCCGAGGCCA CGCTGCGCAT CCGCGTGACC CGGGAACCCG CCGACAACAC CATCGCCCGC ATCATCCGCC TGGTCGAGGA GGCCGAGGAG GCCCGCGCCC CGACCGAGCG CTTCATCGAC CGTTTCAGCC GCTGGTACAT GCCGGCCGTG GTCGCCGTCG CGGCGCTGGT CATGCTGGTG CCGCCCCTGG GCTTCGGCGC GGATTGGGAC ACCTGGGTCT ATCGCGGGCT GGCGCTGCTG CTGATCGGCT GTCCCTGCGC GCTGGTGATC TCGGTCCCGG CCTCGATCGC CTCGGCGCTG TCGGCGGGGG CGCGGCGGGG CCTGCTGATG AAGGGCGGCG CGGTGATCGA GGCTGCGGCC GGCATCCGCC ATGTCGCCCT GGACAAGACC GGCACGCTGA CCCGCGGCCG GCCGGCGGTG GTGCGTATCC TGCCCGCCCC CGGCATCGGC GAGGCCGTGC TGCTGGCCAC CGCCGCCGGC GTCGAGGCCG GGTCCGGCCA CCCGCTCGCG CAAGCCATCC TGCACCGGGC GGCCGAGGCG GGGATCGCGC CGCCGCCGGC CCGCGCAGCC CGCGCCCTGC CCGGCCAGGG GGTCGAGGCC GTGCTGGGCG AAAGCCGCGC CTGGGTCGTC TCGCCCCGAC ATGCCGCCAC GCTGGGCGGG CTTCACGATG CCGGCGCGGC CGAGGCGCTG GAGGCCGAGG GCATGACGGT GGTCGCCGTG CTTGACGAGC ACCGGCCACT GGGCCTGATC GCTCTGCGCG ACGAGCCGCG CCCCGACGCA GCCGAGGCGA TGCGACAGCT AAGGGCCATG GGCATCGAGG CGACCATGCT GACCGGCGAC AACCCCCGCA CCGCCCAGGC CATCGCCGGC ACGCTGGGGA TCGGTTTCCA GGCCGCGATG TTGCCTGCCG ACAAGCTGGC GGCGATTCGC GAGATGGCTG CACAGGGCGG AGTCATGATG ATCGGCGACG GCATCAACGA CGCGCCGGCG CTGAAACAGG CCAGCGTCGG CGTCGCCATG GGTTCGGGCA CGGATGTGGC GCTGGAGACG GCGGATGCGG CGATCCTGCG CGACCGGGTG GCGGACGTGC CCGCGCTGAT CCGGCTGGCG CGGGCGACGA TGGGCAACAT CCGCCAGAAC GTCGCCATCG CGCTGGGTCT GAAGGCGGTG TTCCTGGTGA CCTCGGTGCT GGGCATCACC GGGCTGTGGA TCGCGATCCT TGCCGATACC GGAGCGACGG TGCTGGTGAC GCTGAACGCG CTGCGCCTGC TGGGCCACGA CCCCGGCAAG GTGGGCTGA
|
Protein sequence | MSAEQAQRHE WTVTGMDCAS CSAKVTRAVE RLPGVGEVRV ALMAERLSLT LEPGTTGRDE IEGVVRKLGY GIAPKGQQAP RRKALVLPDA PPPSAEAAAQ PSRHDHDAGG ESWYRTGKGR LVILTGVLLA AAWGLELLTS TETGYWAFLA ACLIGVAPVA RRAWAALRMG QPFTIEALMT MAAIGALFIG AAEEAALVVF LFALGEVLEG VAAGKARDGI RALADLVPKT ALLEIDGATR EISADRLEIG QTVLVRPGDR IPADGEIVDG IGGVDESPVT GESVPRTRGP GEPVFAGSIN AEATLRIRVT REPADNTIAR IIRLVEEAEE ARAPTERFID RFSRWYMPAV VAVAALVMLV PPLGFGADWD TWVYRGLALL LIGCPCALVI SVPASIASAL SAGARRGLLM KGGAVIEAAA GIRHVALDKT GTLTRGRPAV VRILPAPGIG EAVLLATAAG VEAGSGHPLA QAILHRAAEA GIAPPPARAA RALPGQGVEA VLGESRAWVV SPRHAATLGG LHDAGAAEAL EAEGMTVVAV LDEHRPLGLI ALRDEPRPDA AEAMRQLRAM GIEATMLTGD NPRTAQAIAG TLGIGFQAAM LPADKLAAIR EMAAQGGVMM IGDGINDAPA LKQASVGVAM GSGTDVALET ADAAILRDRV ADVPALIRLA RATMGNIRQN VAIALGLKAV FLVTSVLGIT GLWIAILADT GATVLVTLNA LRLLGHDPGK VG
|
| |