Gene Pden_2320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2320 
Symbol 
ID4579373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2318675 
End bp2319826 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content70% 
IMG OID639769650 
Producthypothetical protein 
Protein accessionYP_916107 
Protein GI119385051 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.246253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAA CGCGTCCGCC GATATGCCAG ATCGTCCTGA TGGATGGCAC CTTCGCCTCG 
CTGACCGAGG GGCGAAGGTC GTCCATCGCC CGAATCCATG CCTTGCTCTC GGGCGAATGC
GGCGCGCTGC CCGCGCCTGT GCGGGTGCAT TACGCCCCCG GCCAGCAATG GGATGCCTGG
CGCACGCTGC CGGAACTGGC CATGGGCTCG GCGTTGGAGC GGCATATCTG CGATGCCTAT
GCCTGGCTTG CGCGCGAATG GCGGCCGGGC AATCCGCTGT TTTTCTTTGG CTATTCCCGT
GGCGCCTTTG CGGTGCGCTC GCTTGCGGGG ATGATCGGGC GGGTCGGGCT GCTGACCCAT
GCCCATGCCA CGCGCCGCAA CGTGCAGCAG GCCTGGCAGC TTTACCGACA GGGCCGCGAC
CGGCTGGTCG GCAGGCTGGA CCCCACGCTT TGCCATCCGG TGGTGCCGAT TCGCATGATC
GGCGTCTTCG ACACGGTGAT GGCGCTGGGG ATCAGGTTGC CGCTGCTCTG GATGCTGACC
GAGCCGCGCT TTCGCTTCCA CGACGCGCAT CTGGGTGCCG AGGTCGAGCA TGGCGTGCAG
GCGCTGGCCC TGGACGAGAC TCGCGCCGCC TTTCAGCCGC TGATCTGGGA CAGCGCCTCG
ACGCCGGGCC GGATCGAGCA GATGTGGTTT CGCGGTTGCC ACCCGGACGT GGGCGGCCAG
CTTCTGGGGC TGGAATATGC CCGGCCGCTG GCCAATATCC CGCTGGTCTG GATGATGTCG
CGGGCCGAAG GGTTCGGCCT GCCGCTGCCC GACGATTGGC GCAGGCATTT CGCCTGCGAC
GCCACCGCGC CTTCGGTCGG GTCGTGGCGC AACTGGGGCA AGGCATTCCT GGCGCGCGCG
CCGCGCCTTG CCGGGGCGGA CCCGTCCGAG GTGCTGCATC CTTCCGTGCC GCGGCCCTAT
ACCGGCCCGG CACTGCTGGC CGGGGCGCTG GCCGATGCCG CCCCGCCGCG CCCGCATCGC
CGGCTGGTCC GGGCGAGGCC GAAGGTGCCG GCTGCGGCGG GGTCCGCAAT GGCCGCGCAG
GCCGCAGCGG TCGCGCAGAC CCGCACGCAG CCCGAGACGG CGGCACAACC CGGCGAGGGG
CCGGATGGCT GA
 
Protein sequence
MESTRPPICQ IVLMDGTFAS LTEGRRSSIA RIHALLSGEC GALPAPVRVH YAPGQQWDAW 
RTLPELAMGS ALERHICDAY AWLAREWRPG NPLFFFGYSR GAFAVRSLAG MIGRVGLLTH
AHATRRNVQQ AWQLYRQGRD RLVGRLDPTL CHPVVPIRMI GVFDTVMALG IRLPLLWMLT
EPRFRFHDAH LGAEVEHGVQ ALALDETRAA FQPLIWDSAS TPGRIEQMWF RGCHPDVGGQ
LLGLEYARPL ANIPLVWMMS RAEGFGLPLP DDWRRHFACD ATAPSVGSWR NWGKAFLARA
PRLAGADPSE VLHPSVPRPY TGPALLAGAL ADAAPPRPHR RLVRARPKVP AAAGSAMAAQ
AAAVAQTRTQ PETAAQPGEG PDG