Gene Pden_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2287 
Symbol 
ID4579340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2284145 
End bp2284726 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content69% 
IMG OID639769617 
Producthypothetical protein 
Protein accessionYP_916074 
Protein GI119385018 
COG category[S] Function unknown 
COG ID[COG4803] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.30406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC TGCTTGTCAT CGCCTTCGAC GACGAGGCGA CCGGTTTCGA GTTGCGCACC 
GAGCTGGTCA AGATGCAGAA GGAATACCTG ATCGAGCTTG AGGATGCCGT GGTCGTCACC
CGCCCCTCGG CCGACGATAT CCAGTTGCAT CAGGCCGTGA ACCTGACCGC CGCGGGCGCA
CTTGGCGGCG GGTTCTGGGG CACGCTGGTC GGGCTGATCT TCCTCAACCC GCTGATCGGC
GCGGCGGTGG GCGCGGGCGC CGGCGCCATC GCCGGCAAGC TTTCGGACAT CGGCATCAAC
GACGATTTCA TGCGCGAGCT TGGCCAGTCC ATCCCGCCCG GCGGCTCGGC CGTGTTCATC
CTGGTGCGCA AGATGACCGC CGACAAGGTG CTGGCGCGGC TGGAAAGCTT CCATCTCAGG
GGCCGGGTCA TGCAGACCTC GCTGCCCGAG GCCGAGGAAG AGCGCCTGCG CGAAGCCTTT
GCCGGCGGCA AGCTGGGCTC GGCGCTCGGC ATGCCGCAGG TGGACCGGCC CGCCCCGGGC
GCCGCACCGG CGGCAGGATC GGAGCCTTCG CCCTCGGCCT GA
 
Protein sequence
MSDLLVIAFD DEATGFELRT ELVKMQKEYL IELEDAVVVT RPSADDIQLH QAVNLTAAGA 
LGGGFWGTLV GLIFLNPLIG AAVGAGAGAI AGKLSDIGIN DDFMRELGQS IPPGGSAVFI
LVRKMTADKV LARLESFHLR GRVMQTSLPE AEEERLREAF AGGKLGSALG MPQVDRPAPG
AAPAAGSEPS PSA