| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2285 |
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| Symbol | |
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| ID | 4579338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2281578 |
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| End bp | 2282513 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639769615 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_916072 |
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| Protein GI | 119385016 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.185134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAGAA CCGCCCTGTT GTCGCCTCTT GCCCTTGCCC TTGCAGCTGC GCCCGCGCTG
GCGCAGGACC CCGCCAGTTG CGGAACCGTC CGCTTCTCGG ATCCGGGCTG GACCGATATC
ACCGCCACGA ACGGCGTCGC CATCGCCCTG CTGCAAGGGC TGGGCTACAC GCCCCAGGTC
AGCACGCTGT CGGTTCCCGT CGGCTATGAG GCGCTGAAGA ACGGCGATAC CGACGTCTTC
CTGGGCAACT GGATGCCCGC GCAGCAGAAA TTCCGCGACG ACCTCGACGC CTCGGGCACC
ATCCAGGAAC TGGTGCAGAA CCTCGAAGGC GCCAAGTTCA CCCTGGCCGT CACCGATGCT
GCCGCCGATC TGGGCATCCA GGATTTCGCC GATCTGGATG CGCACAAGGA CGCCTTCCAG
GGCAAGATCT ATGGCATCGA GCCCGGCGCC CCCGCCAACC AGACCATCCA GGGCATGATC
GAAGCGGACA AGTTCGGCCT TGGCGACTGG GAGCTGGTCG AATCGAGCGA ACAGGGCATG
CTGGCGCAGG TCGCGCGCAA CGATGCGGCC AAGACACCCT CGGTCTTCCT GGCCTGGGCG
CCGCATCCGA TGAACGTCAA GCTGGCCATC ACCTATCTGT CGGGCGGGGA CGAGGAGTTC
GGCCCGGATT ACGGCGGCGC CACCGTCCAC ACCCTGGCCC GCAACGAATG GGTCGAAGCC
TGCCCCAACG TGGCGAAGCT GTTCACCCAG CTGACCTTTA CCGTCGATCA GGAAAACCTG
CTGATGGGCA AGATCCTCGA CGACGGCATG GATGCGACCG ATGCCGCCAA GGGTTGGATC
GGCGAAAATG CCGAGACGGT GGCGACATGG CTTGACGGCG TGACCACGCT GGATGGAAAA
CCCGGTGCGG AAGCAGTCAT GGCATCGGTA AAATAA
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| Protein sequence | MLRTALLSPL ALALAAAPAL AQDPASCGTV RFSDPGWTDI TATNGVAIAL LQGLGYTPQV
STLSVPVGYE ALKNGDTDVF LGNWMPAQQK FRDDLDASGT IQELVQNLEG AKFTLAVTDA
AADLGIQDFA DLDAHKDAFQ GKIYGIEPGA PANQTIQGMI EADKFGLGDW ELVESSEQGM
LAQVARNDAA KTPSVFLAWA PHPMNVKLAI TYLSGGDEEF GPDYGGATVH TLARNEWVEA
CPNVAKLFTQ LTFTVDQENL LMGKILDDGM DATDAAKGWI GENAETVATW LDGVTTLDGK
PGAEAVMASV K
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