Gene Pden_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2239 
Symbol 
ID4579293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2241114 
End bp2242151 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content62% 
IMG OID639769569 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_916027 
Protein GI119384971 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.188746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT TCTGGGCCTC GCCCTACGGT TTCGCGCTCA GCATGCTCTT GCAGGGTCTG 
GCGGTCATCG CCTTCGTCAT GGGTTCGCTG ATCTTCATGG TCTATGGCGA CCGCAAGATC
TGGGCGGCGG TGCAGATGCG CCGCGGCCCG AACGTGGTCG GCCCCTGGGG CTTGTTGCAG
ACCTTCGCCG ACGCGCTGAA ATACATCGTC AAGGAAATCG TCATTCCGGC CGGCGCGGAC
AAGTTCGTCT ATTTCCTGGC GCCCTTCCTG TCGATGATGC TGGCGCTGTT CGCCTTTGTG
GTCATCCCCT TCGACGAAGG CTGGGTGATG GCGAACATCA ACGTGGGCAT CCTGTTCATC
TTTGCCGCCT CCTCTCTCGA GGTCTACGGC GTCATCATGG GCGGCTGGGC CTCGAACTCG
AAATATCCGT TCCTCGCCTC GTTGCGGTCG GCGGCGCAGA TGATCTCCTA CGAGGTGTCG
CTGGGGCTGA TCATCATCGG GATCATCATC TCGACCGGCT CGATGAACCT GACCGCCATC
GTCGAGGCGC AGCGCGGCGA TTACGGGTTG CTGAACTGGT ATTGGCTGCC GCACCTGCCG
ATGGTGGTGC TGTTCTTCGT CTCGGCGCTC GCCGAGTGCA ACCGCCCACC CTTCGACCTG
GTCGAGGCCG AGTCCGAACT GGTCGCGGGC TTCATGACCG AATATTCGTC CACGCCCTAC
CTGCTGTTCA TGGCGGGCGA ATATATCGCC ATGTATCTGA TGTGCGCGCT CCTGTCGCTG
CTGTTCTTCG GCGGCTGGCT GTCGCCGGTG CCGTTCATCG CCGACGGCTG GTGGTGGATG
GTCATCAAGA TGTGGTTCTG GTTCTACATG TTCGCCATGG TCAAGGCGAT CGTGCCGCGC
TACCGCTACG ACCAGCTGAT GCGCATCGGC TGGAAGGTGT TCCTGCCCCT GTCGCTGGGC
TGGGTGGTGC TGGTGGCGAT CCTGGCCCGC TACGAAATCC TGGGCGGCTT CTGGGCCCGC
TTTGCGGTCG GAGGATAA
 
Protein sequence
MAEFWASPYG FALSMLLQGL AVIAFVMGSL IFMVYGDRKI WAAVQMRRGP NVVGPWGLLQ 
TFADALKYIV KEIVIPAGAD KFVYFLAPFL SMMLALFAFV VIPFDEGWVM ANINVGILFI
FAASSLEVYG VIMGGWASNS KYPFLASLRS AAQMISYEVS LGLIIIGIII STGSMNLTAI
VEAQRGDYGL LNWYWLPHLP MVVLFFVSAL AECNRPPFDL VEAESELVAG FMTEYSSTPY
LLFMAGEYIA MYLMCALLSL LFFGGWLSPV PFIADGWWWM VIKMWFWFYM FAMVKAIVPR
YRYDQLMRIG WKVFLPLSLG WVVLVAILAR YEILGGFWAR FAVGG