Gene Pden_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2236 
Symbol 
ID4579290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2239647 
End bp2240051 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content64% 
IMG OID639769566 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_916024 
Protein GI119384968 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.32284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG CCTTCCAGAA GCTGTTCCAG CAGATGCTGC AATCCGGCCA GGAGATGGCG 
CGCGCCTTCA ACCCGGCGCT CGAGCATTTC GACATGCGCG CCATGGAAAA GCTGGTGCCG
ACCATTCCTG CCGACATGCT GGAAATGTGG TTCGGCAAGA CCTTCAACCG CGAGGGGCTG
GACGCCAAGA CGCGCCTGCT TCTCACCATC GGCGCGATCA CCGTTCAGGG CGCGCTGGCC
GAGCCGCAAC TGCGCATGAC CGTCCGTCAG GCGCTGGCGG CCGGCGCCAC CAAACGCGAG
ATCGCCGAGA CGATCTTTCA GATGAGCATG TTCGGCGGGC TGCCCGCGAT GCAGAAGGCG
CTGGAAATCG CCCAGAGCGT CTATGCCGAG GAGGACGAGG AATGA
 
Protein sequence
MTDAFQKLFQ QMLQSGQEMA RAFNPALEHF DMRAMEKLVP TIPADMLEMW FGKTFNREGL 
DAKTRLLLTI GAITVQGALA EPQLRMTVRQ ALAAGATKRE IAETIFQMSM FGGLPAMQKA
LEIAQSVYAE EDEE