Gene Pden_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2229 
Symbol 
ID4579283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2231939 
End bp2232718 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content64% 
IMG OID639769559 
Productpantothenate kinase 
Protein accessionYP_916017 
Protein GI119384961 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.8886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTTT GCATCGACAC CGGCAACACC AACACGGTCT TTTCCGTCTG GGACGGCGAG 
AAATTCGTGG GCCTCTGGCG CATCTCGACC GACCACCGGC GCACGGCGGA CGAGTATTTC
GTCTGGCTGT CCACGCTGAT TTCCCTGCAG AAGCTGGAAC TGAACATCGA CGCCTGCATC
ATCAGCTCGA CCGCGCCGCG GGTGGTGTTC AACCTGCGCG TGCTCTGCAA TCGCTATTTC
GACACCCGCC CACTGGTGGT GGGCAAGCCG GACTGCCTGC TGCCTGTGGC GCCGAGGGTC
GATTTCGGCA CCGTGGTCGG CCCCGACCGC CTGGTGAATA CCTGGGGGGC GTTCGAGCGG
CACGGACCGG ACCTGATCGT GGTCGATTTC GGCACCGCGA CGACCTTCGA CGTGGTGGAC
ACCGACGGCG CCTATGTCGG CGGCGTCATT GCGCCGGGGG TGAACCTGTC GCTGGAGGCC
CTGCACATGG GCGCGGCCAG CCTGCCGCAT GTCGACGTGA CCATGCCGGC CAAGGTGATC
GGCACCAATA CCGTGGCCTG CATCCAGTCC GGCATCTTCT GGGGCTATAT CGGCCTGGTG
CAGGGCGTGG TCGACAAGAT CCGCCTGGAA CGCGGCCGGC CGATGAAGGT TATAGCCACG
GGCGGGCTGG CGCCGCTGTT CGACCAGGGA TTTGATTTGT TCGACGCGAT CGAGGACGAC
TTGACCATGC ACGGCCTGCG CCTGATCCAT GATTACAACA AGGAGATGGG CAATGGCTGA
 
Protein sequence
MLLCIDTGNT NTVFSVWDGE KFVGLWRIST DHRRTADEYF VWLSTLISLQ KLELNIDACI 
ISSTAPRVVF NLRVLCNRYF DTRPLVVGKP DCLLPVAPRV DFGTVVGPDR LVNTWGAFER
HGPDLIVVDF GTATTFDVVD TDGAYVGGVI APGVNLSLEA LHMGAASLPH VDVTMPAKVI
GTNTVACIQS GIFWGYIGLV QGVVDKIRLE RGRPMKVIAT GGLAPLFDQG FDLFDAIEDD
LTMHGLRLIH DYNKEMGNG