| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2226 |
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| Symbol | |
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| ID | 4579202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2228138 |
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| End bp | 2229469 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639769556 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_916014 |
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| Protein GI | 119384958 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.284184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACATT CCGCCGAACC GCTGCCGATG ACCGCCCGCC GCTCGGGTCC CCTGACCGGC
GAGGCCCAGG TGCCGGGCGA CAAGTCGATC AGCCATCGCG CGCTGATCCT GGGCGCGCTT
TCGGTGGGCG AGACCCATAT CACCGGCCTG CTGGAGGGCC AGGACGTGCT GGACACGGCA
GCGGCGATGC GGGCCTTCGG TGCGCAGGTC GAGCGGTTGG GCGAGGGGGA GTGGCGCGTC
AACGGCGTCG GGGTCGGCGG CTTTGCCGAG CCCGAGGGGG TGATCGACTG CGGCAATTCC
GGCACCGGCG TGCGGTTGAT CATGGGCGCC ATGGCAACCA CGCCGATCAC CGCCACCTTC
ACCGGCGATG CCAGCCTGTC GCGCCGCCCG ATGGGCCGCG TCACCGACCC GCTGGAACTT
TTCGGCTGCG AGGTCACGGC GCGCGAGGGC AAGCGCCTGC CGCTCACCAT CAAGGGCGCG
TCCGAGCCGG TGCCGGTGCG CTACAAGACC CCGGTCGCCA GCGCCCAGAT CAAGTCGGCG
GTGCTGCTTG CCGGGCTCAA CGCGCCGGGC GAAACGGTGG TGATCGAAGC CGAGCCGACC
CGCGACCATA CCGAGCGCAT GCTGGCCGGC TTCGGTGCCG CCATCACCAC CGAGACGACC
GCCGAGGGGC ATGTCATCAT CCTCAAGGGC CGGCCCGAGT TGAAACCGCA GCCGGTGGCG
GTGCCGCGCG ACCCGTCCAG CGCCGCTTTC CCGGTGGCGG CGGCGCTGAT CGTGCCGGGC
TCGGAAATCC GCGTCCCGGG CGTCAGCCGC AACCCGACCC GCGACGGGCT CTATGTCACG
CTGCTGGAGA TGGGCGCCGA CATCCGCTTC GAGAACCAGC GCGAAGAGGG CGGCGAGCCG
GTCGCCGACC TGGTCGTCCG CCATGGTCCT CTGAAAGGCG TGACCGTGCC CGCCGAACGC
GCCGCCAGCA TGATCGACGA ATTCCCGATC CTCTCGGTCA TCGCCTGCTT TGCCGAGGGC
ACGACCGTCA TGCAGGGTGT TCACGAATTG CGCGTCAAGG AAAGCGACCG CATTGACGCC
ATGGCCGTCG GCCTGCGCGC CAATGGCGCC GAGGTCGTGG ACACCCAGGA TACCATGACC
GTCCACGGCA AGGGCGGGCT CGATGGCGGC GCCACCTGCG CCACCCATCT CGACCACCGC
ATCGCCATGT CCTTCCTGGT CGCGGGCCTC GCCTCGCACC AGCCGATCTC GGTCGATGAC
GGCGGTCCCA TCGCCACCTC CTTCCCCGAT TTCCTGCCGC TGATGCGCGG CCTCGGCGCA
CAAATCGACT GA
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| Protein sequence | MSHSAEPLPM TARRSGPLTG EAQVPGDKSI SHRALILGAL SVGETHITGL LEGQDVLDTA
AAMRAFGAQV ERLGEGEWRV NGVGVGGFAE PEGVIDCGNS GTGVRLIMGA MATTPITATF
TGDASLSRRP MGRVTDPLEL FGCEVTAREG KRLPLTIKGA SEPVPVRYKT PVASAQIKSA
VLLAGLNAPG ETVVIEAEPT RDHTERMLAG FGAAITTETT AEGHVIILKG RPELKPQPVA
VPRDPSSAAF PVAAALIVPG SEIRVPGVSR NPTRDGLYVT LLEMGADIRF ENQREEGGEP
VADLVVRHGP LKGVTVPAER AASMIDEFPI LSVIACFAEG TTVMQGVHEL RVKESDRIDA
MAVGLRANGA EVVDTQDTMT VHGKGGLDGG ATCATHLDHR IAMSFLVAGL ASHQPISVDD
GGPIATSFPD FLPLMRGLGA QID
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