| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2065 |
|---|
| Symbol | |
|---|
| ID | 4578929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2070830 |
|---|
| End bp | 2071036 |
|---|
| Gene Length | 207 bp |
|---|
| Protein Length | 68 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639769395 |
|---|
| Product | cold-shock DNA-binding domain-containing protein |
|---|
| Protein accession | YP_915853 |
|---|
| Protein GI | 119384797 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00142025 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATG GCACCGTGAA ATGGTTCAAT TCCGCCAAGG GTTTCGGCTT CATCCAGCCA
GAGAGCGGCT CGAAGGACAT CTTCGTCCAC ATCTCTGCGG TCGAGCGGGC TGGCATCCAC
CAGCTGAATG ACGGTCAGGC CGTTTCATTC GATCTGGAGC GCGACCGTAA CGGTCGGGAC
TCGGCAACGA ATCTCGTTCT CGCCTGA
|
|---|
| Protein sequence | MANGTVKWFN SAKGFGFIQP ESGSKDIFVH ISAVERAGIH QLNDGQAVSF DLERDRNGRD
SATNLVLA
|
|---|
| |