Gene Pden_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2022 
Symbol 
ID4580406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2029755 
End bp2031164 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content67% 
IMG OID639769351 
Productargininosuccinate lyase 
Protein accessionYP_915810 
Protein GI119384754 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.61578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.73657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC AGCCCACCAC CGCCAACCAG ATGTGGGGCG GACGTTTCGC CGCAGGCCCG 
GACGCGATCA TGGAGGCGAT CAACGCCTCG ATCGGCTTCG ACCAGCGGCT CTATGCCCAG
GACATCCGGG GCAGCCGCGC CCATGCCGCG ATGCTCGCCG CACAAGGCAT CATCAGCACT
AGCGATGCCG AGGCGATCGG GGAAGGGCTG CTCACGGTCT TGTCAGAGAT CGAGAAGGGC
GACTTTCCCT TTTCGACTGC GCTGGAAGAC ATCCACATGA ATGTGGAATC GCGGCTGAAG
GAGATCATCG GCGAGCCGGC GGGGCGCCTG CATACGGCGC GCTCGCGCAA CGACCAGGTG
GCGACCGATT TCCGGCTTTG GGTGCGCGAC CAGTGCGACG CCGCCATCGC CGGGCTGGAC
GCCCTGATCC GCGCCGCCTT GTCGCAGGCC GAGAAGGGCG CGGATTGGGT CATGCCGGGC
TTTACACATC TGCAAACCGC GCAGCCGGTG ACCTGGGGCC ATCACATGAT GGCCTATGTC
GAGATGTTCG GCCGCGACCT GTCGCGTTTC CGGGACGCGC GCAAGCGCAT GAACGAATCG
CCCCTGGGCG CCGCCGCCCT GGCCGGCACC GGCTTTCCCA TCGACCGCGA GGCGACGGCC
CGGGCGCTGG GCTTCGAGCG GCCGATGGCG AACAGCCTCG ACGCGGTCAG CGACCGGGAT
TTCGCGCTGG AATACCTGTC GAGCGCCGCG ATCTGCGCCG TCCACCTGTC GCGGCTGGCC
GAGGAACTGG TGATCTGGTC CTCGGCCCAG TTCCGGTTCG TGACCATGTC GGACCGATTC
TCGACCGGCT CGTCGATCAT GCCGCAGAAG AAGAACCCCG ACGCCGCCGA GCTGATCCGC
GCCAAGATCG GCCGCATCCT GGGCGCGGCG GTGGCGCTGT TCGTGGTGAT GAAGGGCCTG
CCCTTGGCCT ATTCCAAGGA CATGCAGGAG GACAAGGAGC AGGTCTTCGA CGCGAGCGAC
AACCTGATGC TGGCGCTTGC CGCGATGACG GGGATGCTCA CCGACCTGAC CGCGAATCGC
GAGCGGCTGG AGGCGGCGGC GGGCTCGGGC TTCTCGACCG CGACCGACCT GGCTGACTGG
CTGGTGCGCG AGGCCGGGCT GCCCTTCCGC GACGCCCATC ATGCGACCGG CGCGCTGGTC
GCCATGGCCG AGCAGGCGGG CATCGACCTG CCGGACCTGA CGCTGGAACA GATGCAATCG
GTCAACCCGG CGATCACCGC GGATGTCTAT GGCGTGCTGG GCGTGCATAA CTCGGTCGCC
TCGCGCATGA GCTATGGCGG CACCGCTCCG GCGCAGGTCC GCGCCCAGAT CGCCCGCTGG
AAAGAGAAAC TGGAGGAGAA ATCCGCATGA
 
Protein sequence
MTEQPTTANQ MWGGRFAAGP DAIMEAINAS IGFDQRLYAQ DIRGSRAHAA MLAAQGIIST 
SDAEAIGEGL LTVLSEIEKG DFPFSTALED IHMNVESRLK EIIGEPAGRL HTARSRNDQV
ATDFRLWVRD QCDAAIAGLD ALIRAALSQA EKGADWVMPG FTHLQTAQPV TWGHHMMAYV
EMFGRDLSRF RDARKRMNES PLGAAALAGT GFPIDREATA RALGFERPMA NSLDAVSDRD
FALEYLSSAA ICAVHLSRLA EELVIWSSAQ FRFVTMSDRF STGSSIMPQK KNPDAAELIR
AKIGRILGAA VALFVVMKGL PLAYSKDMQE DKEQVFDASD NLMLALAAMT GMLTDLTANR
ERLEAAAGSG FSTATDLADW LVREAGLPFR DAHHATGALV AMAEQAGIDL PDLTLEQMQS
VNPAITADVY GVLGVHNSVA SRMSYGGTAP AQVRAQIARW KEKLEEKSA