Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1992 |
Symbol | |
ID | 4581150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1996322 |
End bp | 1997632 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639769320 |
Product | major facilitator transporter |
Protein accession | YP_915780 |
Protein GI | 119384724 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.252047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGA CCATCGACGA GGCCCTGGCC CAGGGCGGTG CGGGGCGTTT CCAGGGGCGG CTGCTGGGCA TCTTTGGCCT GGTCTGGGCG GCGGATGCGA TGCAGGTCAT CGCCATCGGC TTTACCGCGG CCTCCATCGC CGCGAGCTTT GGGCTGACCG TGCCGCAGGC CCTGCAAACC GGGACGCTTT TCTTCCTGGG CATGTTCGCC GGCGCGACGC TGTTCGGGCG CATCGCCGAC CGGATCGGGC GGCGCAACGT GCTGTTCCTG ACGGTGGGCT GCGATGCGGT CTTCGGCCTT GCCTCGGTCT TTGCGCCGGA CATCTGGTCG CTGATGCTGC TGCGCTTCCT GACCGGGATG GCGGTCGGCG GCACATTGCC GGTCGATTAC GCCATGATGG CCGAGTTCCT GCCGCCCAGG AATCGCGGCC GCTGGCTGGT CTGGCTGGAG GGGTTCTGGG CCGTCGGCAC CATCGCCATC GCCCTGACCG CCTGGATCGC CCATCTGGCC GGCGCGGCCG AGCCCTGGCG CTGGATCTTT GCCATCGCCG CGTTGCCGGC GGTGATCGGC ATCTGGCTGC GGCTCTGGGT GCCGGAATCG CCGATGTATC TGTTGCGCAA GGGCGACGAA GCCGGTGCGC GGGCGGTCGT CGACCGGGTC CTGACCGCGA ACGGCGCCCG CGCCCTGCCG GCAGGCACCC GACTGACCGC GCCGCCCGTC ACTGCCGAGG CGCGGCTTTT CGGCCCCGAG CTGCGCAACC GCAGCCTGGG CATCTTTGCC GCCTGGTTCC TGGTTTCGCT GTCCTATTAC GGCGTCTTCG TCTGGCTGCC GGCGGAACTG GCCAAGGGCG GTTTCGGCTT CGTGCGCGGC TATGGCTTCC TGGTGCTGAT GGCGCTGGCG CAGCTGCCGG GCTATGCGCT GGCGGCGCAT GGCGTGGAAA GCTGGGGCAG GAAGCCCACC TTGCAGATCT TCCTGGTCCT CAGCGCCGCG GGCTGCGTCC TGTTCACCGT CGCCGTCAGT CCCTGGTTGG TGGCCGCATC GCTTCTGCTG ATGAGCTTTG CGCTGCTGGG CACCTGGGGG GCGCTTTACG CCTTCACGCC CGAGCTTTAC CCCACGAGCC TGCGCGGCAC CGGCATGGGC ACCGCCAGCG CGGTGGCGCG GGTGGGCGGG CTTCTGGCAC CCTCGCTCAT GGGCTATGTC GTGGCGCGCG GCTTCGGGGT CGCCATCGGC GTCTTTGCGG CGCTGTTGCT GCTGGCGGCG TTGGCCACGC TGTTCATCCG GGCCGAGACG CGCAACCAGT CCATCGTCTA A
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Protein sequence | MNLTIDEALA QGGAGRFQGR LLGIFGLVWA ADAMQVIAIG FTAASIAASF GLTVPQALQT GTLFFLGMFA GATLFGRIAD RIGRRNVLFL TVGCDAVFGL ASVFAPDIWS LMLLRFLTGM AVGGTLPVDY AMMAEFLPPR NRGRWLVWLE GFWAVGTIAI ALTAWIAHLA GAAEPWRWIF AIAALPAVIG IWLRLWVPES PMYLLRKGDE AGARAVVDRV LTANGARALP AGTRLTAPPV TAEARLFGPE LRNRSLGIFA AWFLVSLSYY GVFVWLPAEL AKGGFGFVRG YGFLVLMALA QLPGYALAAH GVESWGRKPT LQIFLVLSAA GCVLFTVAVS PWLVAASLLL MSFALLGTWG ALYAFTPELY PTSLRGTGMG TASAVARVGG LLAPSLMGYV VARGFGVAIG VFAALLLLAA LATLFIRAET RNQSIV
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