Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1942 |
Symbol | |
ID | 4581064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1943580 |
End bp | 1944182 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639769263 |
Product | hypothetical protein |
Protein accession | YP_915731 |
Protein GI | 119384675 |
COG category | [S] Function unknown |
COG ID | [COG3807] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0398084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00719314 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAAGCAAG GACGGGTCTG GCTCGGCGCC GCGATATTGG CGACGGGGAC GTGTTTGGGG TCGGCGGCGC TGGCGCAGGC CACCGATCCG GGTGAGACGC TGGATGCAAA GCAGATCCCC GGGCTTTCCG CCGATGCGAC AATCAGCCGC CATCAGGACG GCAAGCGCGA CCCGAACCGC GGGTCGGTGA CCAACCTGCC GCTACCGCGC TATGTCAGCC TGAAGGGCGG CGAGGGCAAT GCCCGGCGCG GCCCCAGCCT GTCTCATCGC ATCGACTGGG TGTTCCGCCA TGCCGGCATG CCGCTGCGCG TGGTGGCCGA ATTCGGCCAT TGGCGCCGGG TCGAGGACCA GGACGGCGCC GGCGGCTGGG TGCATTATTC GCTGCTGTCG GGCGTGCGCA CCGCCATCGT GACCAAGGAC ATGCTGGACC TGCTGGCGCG GCCCGAGCCG CGCGCCAGCG TGGTGGCCCG GGCCGAGGCC GGCGCCATCG TCCGGTTGCA CGAATGCATC GTCGACTGGT GCCGGGTCTC GGGCGGCGGC GAAAAGGGCT GGGTGCCCAA GACCACGATC TGGGGCGTCG ATCCCGACGA GATCCGCGAC TGA
|
Protein sequence | MKQGRVWLGA AILATGTCLG SAALAQATDP GETLDAKQIP GLSADATISR HQDGKRDPNR GSVTNLPLPR YVSLKGGEGN ARRGPSLSHR IDWVFRHAGM PLRVVAEFGH WRRVEDQDGA GGWVHYSLLS GVRTAIVTKD MLDLLARPEP RASVVARAEA GAIVRLHECI VDWCRVSGGG EKGWVPKTTI WGVDPDEIRD
|
| |