| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1929 |
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| Symbol | gatB |
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| ID | 4580588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1923126 |
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| End bp | 1924640 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639769250 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_915719 |
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| Protein GI | 119384663 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0337758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0125827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACC ATCTGACCTA TACCGCCCCG GAACCGAAGA TCATTCAGGG TGCGAAACAG
GACTGGGAAC TGGTCATCGG GCTGGAGGTC CATGCCCAGG TCGCCTCGAA CGCCAAGCTG
TTCTCGGGCG CCTCGACCGG CTTCGGGGCC GAGCCGAACA GCCATGTCGC CTTCGTCGAT
GCCGCCATGC CGGGCATGCT GCCGGTGATC AACGAGTTCT GCGTGGCGCA GGCGGTCAAG
ACCGGCCTTG GCCTCAAGGC GGCGATCAAC CTGGTCTCGG CCTTCGACCG CAAGAACTAT
TTCTATCCGG ACCTGCCGCA GGGCTACCAG ATCAGCCAGC TTTATCATCC CATCGTGGGC
GAGGGCGAGG TGATCGTGGA CATGGCCCCC GGCGTCGCCC GCCGCGTCAG GATCGAGCGC
ATCCACCTGG AACAGGATGC CGGCAAGTCG ATCCACGACA TGGACCCGAA CATGTCCTTC
GTGGACCTGA ACCGCACCGG CGTCGCGCTG ATGGAGATCG TCAGCCGCCC CGACATCCGC
GGCCCCGAGG AGGCGGCGGC CTATGTCGCC AAGCTGCGCC AGATCATGCG CTACCTGGGC
ACCTGCGACG GCAACATGCA GAACGGCAAC CTGCGCGCCG ACGTGAACGT GTCGGTCTGC
GCGCCCGGTG CCTATGAGCG CTATCAGGAA ACCGGCGATT TCAGCCATCT CGGCACCCGC
TGCGAGATCA AGAACATGAA CTCGCTGCGC TTCATCCAGC AGGCCATCGA CTACGAGGCC
CGCCGCCAGA TCGCCATCAT CGAGGATGGC GGCAAGGTGG TGCAGGAGAC GCGGCTCTAC
GATCCCGACC GGGGCGAGAC CCGCTCGATG CGCTCCAAGG AAGAGGCGCA CGACTACCGC
TATTTCCCCG ATCCCGACCT GCTGCCCCTG GAGATCGAGC AGGGCTGGGT GGACGATATC
GCCGCCGCCA TGCCGGAGCT GCCGGACGAG AAGAAGGCGC GTTTCGTCAC CGGACTGGGC
CTTTCCGAAT ACGATGCCGG CGTGCTGACC GCCGAGGTCG AGAGCGCCGA CTATTTCGAG
CAGGTCGCCT CGGGCCGCGA CGGCAAGCAG GCCGCGAACT GGGTCATCAA CGAGCTGTTC
GGCCGGCTGA ACAAGGAGGG GCTGAGCGTC GAGACCTCGC CGGTTTCGGC CGCCCAGCTT
GGCGGCGTGA TCGACCTGAT CGGCTCGGGC GCGATCTCGG GCAAGATCGC CAAGGACCTG
TTCGAGATCC TGTGGACCGA AGGCGGCGAC CCGGCCGAGA TCGTCGAGTC GCGCGGCATG
AAGCAGGTTA CCGACCTCGG CGCCATCGAA AAGGCCGTGG ACGAGATCAT CGCCGCGAAC
CCGGCTCAGG TGGAAAAGGC GCGCGCGAAC CCCAAGCTCG CCGGCTGGTT CGTGGGCCAG
GTGCTCAAGG CCACCGGCGG CAAGGCCAAC CCGGCGGCGG TCAACGAGCT GGTGGCAAGG
AAGCTGGGAC AGTAA
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| Protein sequence | MLDHLTYTAP EPKIIQGAKQ DWELVIGLEV HAQVASNAKL FSGASTGFGA EPNSHVAFVD
AAMPGMLPVI NEFCVAQAVK TGLGLKAAIN LVSAFDRKNY FYPDLPQGYQ ISQLYHPIVG
EGEVIVDMAP GVARRVRIER IHLEQDAGKS IHDMDPNMSF VDLNRTGVAL MEIVSRPDIR
GPEEAAAYVA KLRQIMRYLG TCDGNMQNGN LRADVNVSVC APGAYERYQE TGDFSHLGTR
CEIKNMNSLR FIQQAIDYEA RRQIAIIEDG GKVVQETRLY DPDRGETRSM RSKEEAHDYR
YFPDPDLLPL EIEQGWVDDI AAAMPELPDE KKARFVTGLG LSEYDAGVLT AEVESADYFE
QVASGRDGKQ AANWVINELF GRLNKEGLSV ETSPVSAAQL GGVIDLIGSG AISGKIAKDL
FEILWTEGGD PAEIVESRGM KQVTDLGAIE KAVDEIIAAN PAQVEKARAN PKLAGWFVGQ
VLKATGGKAN PAAVNELVAR KLGQ
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