Gene Pden_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1917 
Symbol 
ID4580576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1913285 
End bp1913794 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content64% 
IMG OID639769238 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_915707 
Protein GI119384651 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.233467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA TCAAGGATCC CGAGAACACG GTCATCATCG AGCTGAAGGA CGGCCCGGTG 
GTGATCGAGC TGCTGCCCGA CGTGGCGCCC AAGCACGCCG AGCGCATGAA GGAACTGGCC
CGCGCCGGGA AATACGACAA CGTGGCCTTC CACCGCGTGA TCGAGGGCTT CATGGCCCAG
ACCGGCGACG TGGAACATGC CAACATGGAA AACAACTACA ACCCGGGCCG CGCCGGCACC
GGCGGCTCGG ACCTGCCGGA CCTGCCGGCC GAGTTCTCGC GCCTGCCCCA TGACCGCGGC
ACGCTGGGCG CGGCGCGTTC GATGAACCCG AACTCGGCCA ACAGCCAGTT CTTCATCAAC
TTCAAGGACA ACCATTTCCT GAACGGCCAA TACACCGTCT ATGGCCGGGT GATCGAGGGC
ATGGAGCATG TCGACAAGAT CGCCCGCGGC GAGCCGCCGG CGAATCCCGA CCGGATGATC
TCGGTGAAGG TGGCGGCCGA TGTGGAATAA
 
Protein sequence
MAEIKDPENT VIIELKDGPV VIELLPDVAP KHAERMKELA RAGKYDNVAF HRVIEGFMAQ 
TGDVEHANME NNYNPGRAGT GGSDLPDLPA EFSRLPHDRG TLGAARSMNP NSANSQFFIN
FKDNHFLNGQ YTVYGRVIEG MEHVDKIARG EPPANPDRMI SVKVAADVE