| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1892 |
|---|
| Symbol | |
|---|
| ID | 4580551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1892555 |
|---|
| End bp | 1893310 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639769212 |
|---|
| Product | putative hemolysin |
|---|
| Protein accession | YP_915683 |
|---|
| Protein GI | 119384627 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3176] Putative hemolysin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.185839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.463503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTCAT TCAGCAAGGG CCGCTATGTG GTCGGCTTTG CCGAAAGTGC CGAGAATATC
CGTGAGGCGC AGCGGCTGCG CTGGCTTTGC TTTCTGGGCC GCCGGCCTGG TGCCGAGGCA
TCAGGGGCGC TGGATGCCGA CGATTACGAC GAGCGTTGCA ACCATGTGCT GATTCGCGAC
GACTCTACCG GCGCGCTGGT TGCGTGCTTT CGCATGTTGA CGCTGTCGGG CGGGGCCGAG
ATCGGCGACA GCTATTCCGC GCGCCATTAC AACCTGTCGC GGCTGCGCGA TTTCGACGGC
CGCATGGTCG AGATCGGCCG TTTCTGCATC CATCCCGAAT GGCGCGACCC GGATATCCTG
CGCCTCGCCT GGGGCGCGCT GGCCCGCCAT GTCGACGACG AGCGCATCGA GATGCTTTTC
GGCTGCTCCA GCTTCGTGGG CACCGATACG GACGGCTATG AGGACGCATT CGCCATGCTG
CGCGAGCGGC ATCTGGCGCC GAAGCGCTGG CTGCCGCGCG TGAAGGCGCC GCAGGTGTTT
CGCTTTGCCC GCGCGCTGCG GCTGCGCAAG CCGGATCCGC GCCGGGCCAT GGCGGCGATG
CCGCCGCTTC TGCGCTCATA CCTGGCCATG GGGGGCTGGG TCAGCGATCA TGCGGTGGTG
GACCGCCAAC TCGACACGCT GCATGTCTTT ACCGGGCTGG AGATTCGCGC CATTCCCCCC
GAGCGGGCGA AGCTCTTGCG CGCGGTTGGG GCGTAA
|
|---|
| Protein sequence | MMSFSKGRYV VGFAESAENI REAQRLRWLC FLGRRPGAEA SGALDADDYD ERCNHVLIRD
DSTGALVACF RMLTLSGGAE IGDSYSARHY NLSRLRDFDG RMVEIGRFCI HPEWRDPDIL
RLAWGALARH VDDERIEMLF GCSSFVGTDT DGYEDAFAML RERHLAPKRW LPRVKAPQVF
RFARALRLRK PDPRRAMAAM PPLLRSYLAM GGWVSDHAVV DRQLDTLHVF TGLEIRAIPP
ERAKLLRAVG A
|
|---|
| |