Gene Pden_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1873 
Symbol 
ID4579130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1874653 
End bp1875819 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content67% 
IMG OID639769192 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_915664 
Protein GI119384608 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0192] S-adenosylmethionine synthetase 
TIGRFAM ID[TIGR01034] S-adenosylmethionine synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.176283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.7494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAC AGGACTATGT GTTCACCTCG GAATCCGTCT CCGAGGGCCA CCCCGACAAA 
TTGTGCGACC AGATCTCGGA CGCTGTTCTG GACGCGCTTC TGGCCGAGGA CCCGGCCGCC
CGCGTCGCCT GCGAGGCCTT CGCCACCACC GGCACGGTCG TGATCGGCGG CGAGATCGGG
CTGAGCGACA AGAAAAAGCT TGGCGAATAC ATGGGCCGCA TCGCCGAGAT CGCCCGCAAC
ACCATTCGCG ACATCGGCTA TGAGCAGGAA AAGTTCCACT GGAACACCTG CCATGTCCAC
AACTACCTGC ACGAGCAGTC CGCCCATATC AGCCAGGGCG TCGACCGCGA CGGCGCGGGC
GACCAGGGCA TCATGTTCGG CTATGCCGTC GACGAGACCC CGGAACTGAT GCCGGCGCCG
ATCCAGTATG CGCACGCGAT CCTGCGCCGG CTGGCCGAGG CGCGCAAGTC CGGCGCCGAG
CCGACGCTAG GGCCGGATGC GAAATCCCAG CTGAGCCTGC GCTACGAGAA CGGCAAGCCG
GTCGAGATCA CCAGCCTGGT GCTGTCGCAC CAGCACAAGG ACGAGAGCCA GACCTCGGAC
GACATCCGCG CCATCGTCGA GCCCTATATC CGCGAGGTCC TACCCGCCGA ATGGCTGACC
GAGCGCACGG AATGGTGGGT GAACCCCACG GGCACCTTCG TGATCGGCGG ACCCGACGGC
GACGCCGGCC TGACCGGGCG GAAGATCATC GTCGACACCT ATGGCGGCGC GGCCCCGCAT
GGCGGCGGCG CCTTTTCGGG CAAGGATCCG ACCAAGGTGG ATCGCTCGGC CGCCTATGCC
GCGCGCTACC TGGCCAAGAA CGTCGTCGCG GCCGGACTGG CGAAGCGCTG CGTGATCCAG
CTCAGCTATG CCATCGGCGT GGCGAAGCCC CTGTCGATCT ATGCCGACAC CTTCGGCACC
AGCGAGGTGC CCGAGGCCGA GATCGAGCGC GCCGTCTCGC GGGCCATGGA CCTGACACCG
CGCGGCATCC GCGAGCATCT GGCGCTTTGC CGCCCGATCT ATCGCCGCAC CGCCGCCTAT
GGCCATTTCG GCCGCGCCCC CGATGCCGAT GGCGGTTTCT CGTGGGAGCG GACCGATCTC
GTCGAGGCGA TCAAGCGCGA GCTTTGA
 
Protein sequence
MARQDYVFTS ESVSEGHPDK LCDQISDAVL DALLAEDPAA RVACEAFATT GTVVIGGEIG 
LSDKKKLGEY MGRIAEIARN TIRDIGYEQE KFHWNTCHVH NYLHEQSAHI SQGVDRDGAG
DQGIMFGYAV DETPELMPAP IQYAHAILRR LAEARKSGAE PTLGPDAKSQ LSLRYENGKP
VEITSLVLSH QHKDESQTSD DIRAIVEPYI REVLPAEWLT ERTEWWVNPT GTFVIGGPDG
DAGLTGRKII VDTYGGAAPH GGGAFSGKDP TKVDRSAAYA ARYLAKNVVA AGLAKRCVIQ
LSYAIGVAKP LSIYADTFGT SEVPEAEIER AVSRAMDLTP RGIREHLALC RPIYRRTAAY
GHFGRAPDAD GGFSWERTDL VEAIKREL