Gene Pden_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1831 
Symbol 
ID4578543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1828605 
End bp1829549 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content72% 
IMG OID639769151 
Productalpha/beta hydrolase fold 
Protein accessionYP_915624 
Protein GI119384568 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.600925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCG CACCCTTCAA CACGCTGCCC GGCGATCCGC TCCCCTTGGC CCGCGCCTTC 
TGGCTGCGGG CCGAGGACGG GGTGCGGCTC CGGGCGGCGC ATTGGGCGGC GGGCGGCGCC
TCGGGGACGG TGCTGCTGTT TCCGGGCCGC ACGGAATATC TAGAGAAATA CAACGACATC
GCGGCAGAAT TGAATGCCGC CGGGCTGGAC GTGCTGGCAC CGGACTGGCG CGGCCAGGGC
ATGTCCGACC GATTGCAGGA CAATACCCGC CCCGGCCATG TCGGCGATTT CGCCGATTAC
CAGCGCGACG TGGTCGAACT GGTCGTCGCC GCGCAGGAAC TGGACCTGCC CCGGCCCTGG
CATCTTCTGG CGCATTCCAT GGGCGGCGCC ATCGGCCTTG CGGCGCTGGA TGCCGGGCTG
CCGGTGGAAA GCGTGGTCTT CTCGGCGCCG ATGTGGGGCA TCGACCTGCG CCGCGTGCCG
GAAGCCGTCG CCATGGCCGT CGCCCGGCTT GGCATCCGGC TGGGCCGGAG CGGCCATCCC
GCTCCCGGCT CGGGGGGCGA GGAAAGCTTC GTGCTGCTGG ACCCTTTCCA CGACAACCTG
CTGACCGGGG ACGGCCGGCG CTGGGGCCGG CTGGTGGCCG AGGCCGCCAC CTGGCCCGAT
ATCGCGGTCG GCGGCGCCAG CTACGGCTGG CTGCGCGCGG CGCTTCTGGA ATGCCGCCGC
CTCGCCGCCC TGCCCTCGCC GGCACTGCCG GCGCTGATCG CGCTTGGCGA TCGCGAGCGG
ATCGTCTCGC CCCATGCCAT CCGCACCCGC GTCGCCGCCT GGCCCGGCGC CACCATGCTG
GACTTGCCCG ATTGCCGGCA TGAGCCGATG ATGGAGCGCG ACCCCGTCCG CAGCCGCTTT
CTTGAAGCCG CCCTCGCCCA TTTCGAGTCC GCCGCGGCGG GCTGA
 
Protein sequence
MKPAPFNTLP GDPLPLARAF WLRAEDGVRL RAAHWAAGGA SGTVLLFPGR TEYLEKYNDI 
AAELNAAGLD VLAPDWRGQG MSDRLQDNTR PGHVGDFADY QRDVVELVVA AQELDLPRPW
HLLAHSMGGA IGLAALDAGL PVESVVFSAP MWGIDLRRVP EAVAMAVARL GIRLGRSGHP
APGSGGEESF VLLDPFHDNL LTGDGRRWGR LVAEAATWPD IAVGGASYGW LRAALLECRR
LAALPSPALP ALIALGDRER IVSPHAIRTR VAAWPGATML DLPDCRHEPM MERDPVRSRF
LEAALAHFES AAAG