Gene Pden_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1813 
Symbol 
ID4580513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1807328 
End bp1808242 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content72% 
IMG OID639769133 
Productindigoidine synthase A family protein 
Protein accessionYP_915606 
Protein GI119384550 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2313] Uncharacterized enzyme involved in pigment biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.114344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0086217 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCCCCC TGATCGCGCT TTCCCCCGAA ACCTCGCAGG CGCTGGCCGA CCGCCAGCCC 
CTGGTGGCGC TGGAATCGAC CATCATCACC CATGGCATGC CCTATCCGCA GAACCTCGAG
GTGGCGCAGC AGGTCGAGGC CGCGGTGCGC GAAGAGGGCG CCGTGCCCGC CACCATCGCA
GTGATGGGCG GGCGCATCCG CGTGGGCCTG GATGCCGAGG CGCTGGAGGC GCTGGCCTCG
ACGCCGGCCG AGCAGGTGAT GAAGCTGTCG CGCGCCGACC TCGCCGCCTG CCTGGCGCTG
GGACGGACCG GGGCGACCAC GGTGGCCGCC ACGATGATCT GCGCCCATCT GGCCGGGATC
GAGGTCTTTG CCACCGGCGG CATCGGCGGC GTGCATCGCG GCGCCGAAAC CAGCTTCGAC
ATCTCGGCCG ACCTGCAGGA GCTGGCGCAA AGCCCGGTCA CGGTGGTCGC GGCCGGGGCC
AAGGCGATCC TGGACCTGCC CAAGACGCTG GAGGTGCTGG AAACGCTGGG CGTGCCGGTG
ATCGCCTTCG GCCAGGACCA GTTGCCGGCC TTCTGGTCGC GCGAATCGGG CCTTGCCGCG
CCGCTGCGCA TGGACGACCC GGCCCAGATC GCCGCCAGCG CCCGGCTGCG GCGCGAACTG
GGCCTCTCGG GCGGCCAGCT GGTGGTGAAC CCGATCCCCC CGGAGGCCGA GATCCCGCGC
GCAGAGATGA TCCCGGTGGT CGAACAGGCG CTTTCCGAGG CCGAGGCGCA GGGCATCGCG
GCCAAGGCGG TCACGCCCTT CCTGCTGCAA CGCATCTTCG AGCTGACCCA GGGCCGCTCG
CTCGACGCCA ATATCGCGCT GGTGCTGAAC AATGCCCGGC TGGCCGCGCG CATCGCCGCC
GCCATGGCCA CCTAG
 
Protein sequence
MPPLIALSPE TSQALADRQP LVALESTIIT HGMPYPQNLE VAQQVEAAVR EEGAVPATIA 
VMGGRIRVGL DAEALEALAS TPAEQVMKLS RADLAACLAL GRTGATTVAA TMICAHLAGI
EVFATGGIGG VHRGAETSFD ISADLQELAQ SPVTVVAAGA KAILDLPKTL EVLETLGVPV
IAFGQDQLPA FWSRESGLAA PLRMDDPAQI AASARLRREL GLSGGQLVVN PIPPEAEIPR
AEMIPVVEQA LSEAEAQGIA AKAVTPFLLQ RIFELTQGRS LDANIALVLN NARLAARIAA
AMAT