Gene Pden_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1808 
Symbol 
ID4580508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1802128 
End bp1802658 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content66% 
IMG OID639769128 
Productcytochrome c, class I 
Protein accessionYP_915601 
Protein GI119384545 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.115108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATA CCATGACCGT CACCAAGGCA GCCGGTGCGC TGATCGGCTC GCTTCTGTTC 
CTTCTGCTGA TGAGCTGGGC GGCATCGGGT ATCTTTCACG TCGGCACCTC GGGCCACGGC
GCCGAGGGCG AAGAGCATGC CCAGGCATAT ACCATCCCGG TCGAGAGCGC CGGCGGCGCC
GAGGGCGAGG CCGTGGACGA AGGCCCCGAT TTTGCCACCG TCCTGGCCTC GGCCGATCCC
GCCGCTGGCG AGAAGGTGTT CGGCAAGTGC AAGGCCTGCC ACAAGCTGGA CGGCAACGAT
GGCGTCGGCC CGCATCTGAA CGGCGTCGTC GGCCGCACGG TCGCAGGCGT CGATGGCTTC
AACTATTCCG ACCCGATGAA GGCGCATGGC GGCGACTGGA CCCCCGAGGC GCTGCAGGAA
TTCCTGACCA ACCCGAAAGC GGTGGTCAAG GGCACCAAGA TGGCCTTCGC CGGCCTGCCC
AAGATCGAGG ATCGCGCCAA CCTGATCGCC TATCTGGAAG GCCAGCAGTA A
 
Protein sequence
MFDTMTVTKA AGALIGSLLF LLLMSWAASG IFHVGTSGHG AEGEEHAQAY TIPVESAGGA 
EGEAVDEGPD FATVLASADP AAGEKVFGKC KACHKLDGND GVGPHLNGVV GRTVAGVDGF
NYSDPMKAHG GDWTPEALQE FLTNPKAVVK GTKMAFAGLP KIEDRANLIA YLEGQQ