Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1808 |
Symbol | |
ID | 4580508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1802128 |
End bp | 1802658 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639769128 |
Product | cytochrome c, class I |
Protein accession | YP_915601 |
Protein GI | 119384545 |
COG category | [C] Energy production and conversion |
COG ID | [COG3474] Cytochrome c2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.115108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGATA CCATGACCGT CACCAAGGCA GCCGGTGCGC TGATCGGCTC GCTTCTGTTC CTTCTGCTGA TGAGCTGGGC GGCATCGGGT ATCTTTCACG TCGGCACCTC GGGCCACGGC GCCGAGGGCG AAGAGCATGC CCAGGCATAT ACCATCCCGG TCGAGAGCGC CGGCGGCGCC GAGGGCGAGG CCGTGGACGA AGGCCCCGAT TTTGCCACCG TCCTGGCCTC GGCCGATCCC GCCGCTGGCG AGAAGGTGTT CGGCAAGTGC AAGGCCTGCC ACAAGCTGGA CGGCAACGAT GGCGTCGGCC CGCATCTGAA CGGCGTCGTC GGCCGCACGG TCGCAGGCGT CGATGGCTTC AACTATTCCG ACCCGATGAA GGCGCATGGC GGCGACTGGA CCCCCGAGGC GCTGCAGGAA TTCCTGACCA ACCCGAAAGC GGTGGTCAAG GGCACCAAGA TGGCCTTCGC CGGCCTGCCC AAGATCGAGG ATCGCGCCAA CCTGATCGCC TATCTGGAAG GCCAGCAGTA A
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Protein sequence | MFDTMTVTKA AGALIGSLLF LLLMSWAASG IFHVGTSGHG AEGEEHAQAY TIPVESAGGA EGEAVDEGPD FATVLASADP AAGEKVFGKC KACHKLDGND GVGPHLNGVV GRTVAGVDGF NYSDPMKAHG GDWTPEALQE FLTNPKAVVK GTKMAFAGLP KIEDRANLIA YLEGQQ
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