Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1804 |
Symbol | |
ID | 4580504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1796176 |
End bp | 1797789 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639769124 |
Product | ABC transporter related |
Protein accession | YP_915597 |
Protein GI | 119384541 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.147708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCGG TTCTGGAAGT CAGCGACCTG CGGGTGGGGT TCCGGCAGGA CGGGCAGCTT GCGCCCGCCG TCAAGGGCGT CAGCTTTACC GTCGGCAAGG GCGAGACGGT GGCGCTGGTC GGCGAATCCG GCTCGGGCAA ATCGGTCACG GCGCTTTCGA CGGTGCGGCT GCTGGGCGAG GCGGCAGAGG TCTCGGGCTC GGTCCGCTAT GACGGGCGCG AATTGCTGGG CGCGGCCGAG CCGGAACTGC GTCGGGTGCG CGGCAACGAC ATCAGCTTCA TCTTTCAAGA GCCGATGACC TCGCTGAACC CCCTGCACAC GCTGGAGCGG CAGCTTGCCG AAAGCCTGGC GCTGCATCAG GGGCTGCGCG GCGCGGCGGC GCGGGCGCGC ATCATCGAGC TGCTGACCCG CGTCGGCATC CGCGACCCGG AAACGCGGCT TGCCGATTAC CCGCACCAGC TGTCCGGCGG CCAGCGCCAG CGGGTGATGA TCGCCATGGC GCTGGCGAAC GGGCCGGAAC TGCTGGTCGC GGATGAGCCG ACGACGGCGC TGGACGTGAC CATCCAGGCG CAGATCATGG AACTCTTGGC AGAGCTCAAG GCTGCCGAGG GGCTGTCGAT GCTGTTCATC AGCCACGACC TGGGCCTGGT GCGGCGCATC GCCGACCGGG TCTGCGTGAT GAAGGGCGGC GAGATCGTCG AGCAGGGCCC GGTCGAGCAG ATCTTTGCCC ATCCGCAGCA CGAATATACC CGCATGTTGC TGGCCGCCGA GCCACAGGGC CGCGCCGACC CCATTCCCGC CGACGCGCCG CAGGTCGTGG CGACGCAGGA TCTGCGGGTC TGGTTCCCGA TCCAGCGCGG CTTCCTGCGC CGCACCGTCG GCCATGTGAA GGCGGTGAAC GGCGCCACGA TCTCGGTCCG CGCCGGCGAG ACCCTGGGCA TCGTCGGTGA ATCCGGCTCG GGCAAGACCA CGCTGGCGCT GGCGATCATG CGGCTGATCG AGAGCGAGGG GCCGATCCTC TACATGGGCC GCGACATCTC GAAACTGCCG GGTCGGGCGC TGCGCGGCTT GCGCCGCGAC ATGCAGATCG TATTCCAGGA TCCCTTTGGC AGCCTGTCGC CGCGCATGAC GGTCGAGCAG ATCATCTCCG AGGGCCTGGG CGTGCATGGC ATCGAGCCGG GCCGCGACCG CCGCGGGATG GTGGACGAAA TCATGCGCGA GGTCGGGCTG GACCCCGCCA CCATGCACCG CTATCCGCAT GAATTCAGCG GCGGCCAGCG CCAGCGCATC GCCATCGCCC GCGCCATGAT CCTGAACCCC AGGCTGGTGG TGCTGGACGA GCCGACCAGC GCATTGGACA TGACCGTGCA GGTGCAGATC GTCGAGCTTT TGCGGCGGCT GCAACGCAAG CACGGGCTTA CCTTCCTGTT CATCAGCCAC GACCTGCGCG TCGTGCGTGC CATGTCGCAC CAGATCATGG TCATGCGCGC GGGCGAGGTG GTCGAGCAGG GATCGACCCA GGCGGTCTTC GACAATCCGC AAAGCGACTA CACTCGCCGT CTGATCGAGG CGGCGTTTCT TACGGTAATA AGTGAAGATT TTTCGGTAAT TTAA
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Protein sequence | MTPVLEVSDL RVGFRQDGQL APAVKGVSFT VGKGETVALV GESGSGKSVT ALSTVRLLGE AAEVSGSVRY DGRELLGAAE PELRRVRGND ISFIFQEPMT SLNPLHTLER QLAESLALHQ GLRGAAARAR IIELLTRVGI RDPETRLADY PHQLSGGQRQ RVMIAMALAN GPELLVADEP TTALDVTIQA QIMELLAELK AAEGLSMLFI SHDLGLVRRI ADRVCVMKGG EIVEQGPVEQ IFAHPQHEYT RMLLAAEPQG RADPIPADAP QVVATQDLRV WFPIQRGFLR RTVGHVKAVN GATISVRAGE TLGIVGESGS GKTTLALAIM RLIESEGPIL YMGRDISKLP GRALRGLRRD MQIVFQDPFG SLSPRMTVEQ IISEGLGVHG IEPGRDRRGM VDEIMREVGL DPATMHRYPH EFSGGQRQRI AIARAMILNP RLVVLDEPTS ALDMTVQVQI VELLRRLQRK HGLTFLFISH DLRVVRAMSH QIMVMRAGEV VEQGSTQAVF DNPQSDYTRR LIEAAFLTVI SEDFSVI
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