Gene Pden_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1804 
Symbol 
ID4580504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1796176 
End bp1797789 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content67% 
IMG OID639769124 
ProductABC transporter related 
Protein accessionYP_915597 
Protein GI119384541 
COG category[R] General function prediction only 
COG ID[COG4172] ABC-type uncharacterized transport system, duplicated ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.147708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGG TTCTGGAAGT CAGCGACCTG CGGGTGGGGT TCCGGCAGGA CGGGCAGCTT 
GCGCCCGCCG TCAAGGGCGT CAGCTTTACC GTCGGCAAGG GCGAGACGGT GGCGCTGGTC
GGCGAATCCG GCTCGGGCAA ATCGGTCACG GCGCTTTCGA CGGTGCGGCT GCTGGGCGAG
GCGGCAGAGG TCTCGGGCTC GGTCCGCTAT GACGGGCGCG AATTGCTGGG CGCGGCCGAG
CCGGAACTGC GTCGGGTGCG CGGCAACGAC ATCAGCTTCA TCTTTCAAGA GCCGATGACC
TCGCTGAACC CCCTGCACAC GCTGGAGCGG CAGCTTGCCG AAAGCCTGGC GCTGCATCAG
GGGCTGCGCG GCGCGGCGGC GCGGGCGCGC ATCATCGAGC TGCTGACCCG CGTCGGCATC
CGCGACCCGG AAACGCGGCT TGCCGATTAC CCGCACCAGC TGTCCGGCGG CCAGCGCCAG
CGGGTGATGA TCGCCATGGC GCTGGCGAAC GGGCCGGAAC TGCTGGTCGC GGATGAGCCG
ACGACGGCGC TGGACGTGAC CATCCAGGCG CAGATCATGG AACTCTTGGC AGAGCTCAAG
GCTGCCGAGG GGCTGTCGAT GCTGTTCATC AGCCACGACC TGGGCCTGGT GCGGCGCATC
GCCGACCGGG TCTGCGTGAT GAAGGGCGGC GAGATCGTCG AGCAGGGCCC GGTCGAGCAG
ATCTTTGCCC ATCCGCAGCA CGAATATACC CGCATGTTGC TGGCCGCCGA GCCACAGGGC
CGCGCCGACC CCATTCCCGC CGACGCGCCG CAGGTCGTGG CGACGCAGGA TCTGCGGGTC
TGGTTCCCGA TCCAGCGCGG CTTCCTGCGC CGCACCGTCG GCCATGTGAA GGCGGTGAAC
GGCGCCACGA TCTCGGTCCG CGCCGGCGAG ACCCTGGGCA TCGTCGGTGA ATCCGGCTCG
GGCAAGACCA CGCTGGCGCT GGCGATCATG CGGCTGATCG AGAGCGAGGG GCCGATCCTC
TACATGGGCC GCGACATCTC GAAACTGCCG GGTCGGGCGC TGCGCGGCTT GCGCCGCGAC
ATGCAGATCG TATTCCAGGA TCCCTTTGGC AGCCTGTCGC CGCGCATGAC GGTCGAGCAG
ATCATCTCCG AGGGCCTGGG CGTGCATGGC ATCGAGCCGG GCCGCGACCG CCGCGGGATG
GTGGACGAAA TCATGCGCGA GGTCGGGCTG GACCCCGCCA CCATGCACCG CTATCCGCAT
GAATTCAGCG GCGGCCAGCG CCAGCGCATC GCCATCGCCC GCGCCATGAT CCTGAACCCC
AGGCTGGTGG TGCTGGACGA GCCGACCAGC GCATTGGACA TGACCGTGCA GGTGCAGATC
GTCGAGCTTT TGCGGCGGCT GCAACGCAAG CACGGGCTTA CCTTCCTGTT CATCAGCCAC
GACCTGCGCG TCGTGCGTGC CATGTCGCAC CAGATCATGG TCATGCGCGC GGGCGAGGTG
GTCGAGCAGG GATCGACCCA GGCGGTCTTC GACAATCCGC AAAGCGACTA CACTCGCCGT
CTGATCGAGG CGGCGTTTCT TACGGTAATA AGTGAAGATT TTTCGGTAAT TTAA
 
Protein sequence
MTPVLEVSDL RVGFRQDGQL APAVKGVSFT VGKGETVALV GESGSGKSVT ALSTVRLLGE 
AAEVSGSVRY DGRELLGAAE PELRRVRGND ISFIFQEPMT SLNPLHTLER QLAESLALHQ
GLRGAAARAR IIELLTRVGI RDPETRLADY PHQLSGGQRQ RVMIAMALAN GPELLVADEP
TTALDVTIQA QIMELLAELK AAEGLSMLFI SHDLGLVRRI ADRVCVMKGG EIVEQGPVEQ
IFAHPQHEYT RMLLAAEPQG RADPIPADAP QVVATQDLRV WFPIQRGFLR RTVGHVKAVN
GATISVRAGE TLGIVGESGS GKTTLALAIM RLIESEGPIL YMGRDISKLP GRALRGLRRD
MQIVFQDPFG SLSPRMTVEQ IISEGLGVHG IEPGRDRRGM VDEIMREVGL DPATMHRYPH
EFSGGQRQRI AIARAMILNP RLVVLDEPTS ALDMTVQVQI VELLRRLQRK HGLTFLFISH
DLRVVRAMSH QIMVMRAGEV VEQGSTQAVF DNPQSDYTRR LIEAAFLTVI SEDFSVI