Gene Pden_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1800 
Symbol 
ID4580500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1792805 
End bp1793632 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content67% 
IMG OID639769120 
Productsulfate ABC transporter, inner membrane subunit CysW 
Protein accessionYP_915593 
Protein GI119384537 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR02140] sulfate ABC transporter, permease protein CysW
[TIGR00969] sulfate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.135364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCA CCCTTGCGCT GACCCACGCC CCCGGCCAAA GCCGCACCGC GCCGCGCCTG 
CTGATCGGGC TGGCCTTCGC GCTGACGGCG ATCTTCGTCG TGGCACCGCT GGCCTTCATC
TTCTGGCGCG CCTTCGCAGA CGGCTGGGCG GTCTATCTGA AGAACATCGC CGACCCGCTG
GTCGTGCATG CGATCTGGCT GACCACGGTG GTCGCGGTGA TCGTGGTGCC GGTCAACATC
GCCTTCGGCA TCGCCGCCGC CTGGGCCATC GCCCGCTTCC GCTTTCCGGG GCGCAAGCTT
CTGATGGTGC TGATCGAGAT CCCCTTTTCG ATCTCGCCGA TCATCGCCGG CATCTGCTAC
CTGCTGCTTT ACGGCCGGCA GGGCCTGCTG GGACCGTGGC TCGCCGCGCA TGACCTGAAG
GTCATGTTCG CCCTGCCCGG CATCGTGCTG GTCACCATGT TCGTCACCGC CCCCTTCGTG
GTGCGCGAGG TGCTGCCGCT GATGCAGGCC CAGGGCTCGG AGCAGGAGCA GGCGGCGGTC
ACGCTGGGCG CGCGCGGCTG GCAGGTGTTT TCCCGCGTGA CCCTGCCCAA CATCCGCTGG
GCGCTGCTTT ACGGCGCGGT GCTCTGCACC GCCCGCGCGG TGGGCGAATT CGGCGGGGTC
TCGGTGGTTT CCGGCTCGAT CCGGGGCCAG ACCAACACCC TGCCGTTGCA GATCGAGCTG
ATGTTCAACG ATCTCAACAC CACCGGCGCC TTTGCCGCAG CCTCGACCCT GACCGTCATC
GCGCTGGTCG TGTTGGTGAT CAAGGCGGCA CTGGAAAGCC GCAGGTAA
 
Protein sequence
MMSTLALTHA PGQSRTAPRL LIGLAFALTA IFVVAPLAFI FWRAFADGWA VYLKNIADPL 
VVHAIWLTTV VAVIVVPVNI AFGIAAAWAI ARFRFPGRKL LMVLIEIPFS ISPIIAGICY
LLLYGRQGLL GPWLAAHDLK VMFALPGIVL VTMFVTAPFV VREVLPLMQA QGSEQEQAAV
TLGARGWQVF SRVTLPNIRW ALLYGAVLCT ARAVGEFGGV SVVSGSIRGQ TNTLPLQIEL
MFNDLNTTGA FAAASTLTVI ALVVLVIKAA LESRR