Gene Pden_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1774 
Symbol 
ID4580938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1763222 
End bp1764313 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content71% 
IMG OID639769090 
Productperiplasmic binding protein 
Protein accessionYP_915567 
Protein GI119384511 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.363885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTTC GACTGATCCT GATGCTTGCC CTGTTCGTGC CCGCGCTTGC GCGGGCCGAA 
CTGCGCCTGA CCGATGCCGC CGGGCGCGAG GTCGTGCTGC CCGGCCCGGC GCGCAAGATC
GTCATCAATG ACAGTCTGCT GCTGCTGTCC CTGGCGCTGC TGGAGGACGA CCCGGTCGCG
CCGCTTCTGG GCTGGGGCGG CGACAACCGT GTCGATGCGG GGCTGCGCGC CGCATTTCGC
GCCCGATTTC CCGGCATCGA TGCCGTGCCC GAGATTTCGG GCGTCGTGCC GCGCTCGACC
TCGGCCGAGC CGATCATCGC GGTGGCGCCC GATCTTTATG TGGTGACGCT GTGGGATTCC
GGCTGGCTGC CGCTGGTCGA CAAGCTTCAG GCGGCGGGCA TCCCGGTCCT GTTCCTGGAA
GACCCGGCGG ATCACCGGAT CGGCCGGATC GAATCCTCGG CCCGCGCGCT GCGGCTGCTG
GGACAGGCCA TGGGCAGCGA GGCGCGGGCG CGGGCCTATG CCGATTTCGC CGACCGGCGG
CTGCACGCCA TTGCCGCCCG TATCGGCCCG GACACGGCCC GTCCGCGGGT GCTGATCGAC
GCCCATGCCT CGGGCGAGTG CTGCGCCATT CCGGGCCGCA ACAACATGCT TGCGCAGATG
GTGGCGTTGG CGGGGGGCGA AAGCTACGGC TCGGCCGCCG TTCCCGGCTA TGACGGCCGC
GTGGCACTGG AGCCGCTGAT CGCCGATCCG CCGGCGATAT GGATCGGCAC CGGCGGCGCC
CATCTGGCCG GCAGCGGCGG GCTGGTGCTG GGCACCGGGA TCGAGCCCGC CGCCGCGCAG
GCCTCGCTGC GCCGCGTGCT GGACGGCACG ATGCGGCGCC TGATCCCCCC GGTGGCCGAG
GGGCGGTCCC ATGCCGTCTC GCATCAGCTG GCGATCTCGG CGCTGAACCT CGTGGTGACG
GAATGCTTCG CGCGCTGGAT CCACCCCGAA CTCTTCGGCG CGCTCGACCC TCGGGAAACG
ATGGCGCGGA TCGACGCCGA GTTTCTTGCC GTGCCGTTGA CCGGCAGCTT CTGTATCGAC
GCAAAGGAAT AG
 
Protein sequence
MLFRLILMLA LFVPALARAE LRLTDAAGRE VVLPGPARKI VINDSLLLLS LALLEDDPVA 
PLLGWGGDNR VDAGLRAAFR ARFPGIDAVP EISGVVPRST SAEPIIAVAP DLYVVTLWDS
GWLPLVDKLQ AAGIPVLFLE DPADHRIGRI ESSARALRLL GQAMGSEARA RAYADFADRR
LHAIAARIGP DTARPRVLID AHASGECCAI PGRNNMLAQM VALAGGESYG SAAVPGYDGR
VALEPLIADP PAIWIGTGGA HLAGSGGLVL GTGIEPAAAQ ASLRRVLDGT MRRLIPPVAE
GRSHAVSHQL AISALNLVVT ECFARWIHPE LFGALDPRET MARIDAEFLA VPLTGSFCID
AKE