| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1757 |
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| Symbol | |
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| ID | 4580921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1743278 |
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| End bp | 1744984 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639769072 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_915550 |
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| Protein GI | 119384494 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000293147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.187754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGAC CCTCAGAGGC AGAAGAGACC GGGACAGTGA GCAGAATCGC AAGAAACGTC
CGCTTGGGAC TGATGATCCT ATTCGCCTGG GCGCTGCCCA TGGCGGTAGC CGCCGCCCCT
TTCGCAGCCT TCGTCATGGA TGCGCGAACC GGGCAGGAAG TCTATGCGCA GAACGCGGAT
ACGCGGCTGC ATCCGGCCTC GCTGACCAAG ATGATGACGC TTTACATGGC CTTCAACGCC
ATCGAGCGGG GGCAGGTCCG GCTGGACAGC AAGTTCCTGG TGTCCAGCCA TGCCGCGGCG
CAGCCGCCCT CGCGGCTGGG GCTGAAACCG GGCCAGCGGA TCGAGCTGCG CTACCTGATC
CGCGCGGCGG CGGTGAAGTC CGCCAACGAC GCGGCCACGG TGATCGGCGA GGGGCTGGCC
GGGTCCGAGG CGAAATTCGC CGCGCAGATG ACCCAGATGG CCCGCGCGCT GGGGATGCGC
AACACGAATT TCCGCAACGC CAACGGGCTG ACGGCCGAGG GGCATTATTC CACGGCGCGG
GACATGACCG TCCTCGGGCG CCGCCTGTTC TACGATTTCC CGCAATATTA CTCGATCTTC
TCGCGCCGTT CGGCGGATGC GGGGATCGCC ACCGTCGCCA GCACCAACAA GCGCTTTCTC
GACAGCTATG AGGGCGCGGA CGGCATCAAG ACCGGCTACA CGCGGGCGGC CGGCTTCAAC
CTGACCGCCT CGGCCAAGCG CGGCTCCAAA CGGATCATCG CCACTGTGCT GGGCGGCACC
TCGACGGCGC ATCGCAACCA GGTCATGGCG CAACTGCTCG ATGCCGGCTT CGGAAAGGCC
CCCACCCGTG TGCGAGAGGT GAAGCCCGCG CCGCCGCAGC TGGTGGCCGA GAAGAAGGTG
CGCCGCACCG TGCAGGTCGC ACGCGCCGAA CCGCGCCAGG CGGTGGCGAA CGTGCAGCTT
TCCACTTCCG ACCGGCCGGT GGCGCGCGCC TCGACCGCCG CGGTGGTGAC CCCGGCGGCG
ATTTCGGCCG CGGTCTCGCG CGCCCAGGCT ACGGCGGCAC CCGCACCTTC CGGCGGCGGC
AGCACCCTGA CCGCCAGCGC CCGGCCGACG CGCAAGCCCG GCACCGGCCA ATTCGCCAAT
GCCGCCATGG ACCCCGAGAT ATTGGCCCGT GCGGCCCGTC CCGAAGCCCG CCCGGAAGAA
GGCGACACCT CGGAAACGGT CGCCGAACCG CTGAATGCCG CCCGCCCCAA GCCCTCGCCG
CGAGGCGATC GGTCGGCCGA GCTTTCCACC CCGGCCGCGG GCTCGCCCTC GCTTTTCGTG
CAATCGACCC AGCCGCAGCC GGAAAGCATG GCGCTTCTGG ACACGCCCGC ACCCGCGCAG
CGGTCCGAGA CCATCATCCT CGCCTCGCTG GACCCCGACG AGGAAACCGC CCCGCAAGCG
ACCGAGATCG TTGCCCGCGG ATCGGGTTCG GGCGGCAAGA ACTGGGGGGT CTCGCTGGGC
CTGTTCCGCT CGCAACGCGA GGCCGAGCAG GTTCTGCTGA AAACCGCCCT TCAGGAAAGC
GGCGCCCTGG GCAGCGCGCT CAGCCGGGTC GCCAATACCA AGCGCGGCTT CGAGGCGAAC
TTCGTCGGCA TGAACCGGGA AACCGCCGAA CTCGCCTGCG GCCGGATCGC GGCGCGGCAG
CAGGATTGCC GGATCATCGG CCCGTGA
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| Protein sequence | MNGPSEAEET GTVSRIARNV RLGLMILFAW ALPMAVAAAP FAAFVMDART GQEVYAQNAD
TRLHPASLTK MMTLYMAFNA IERGQVRLDS KFLVSSHAAA QPPSRLGLKP GQRIELRYLI
RAAAVKSAND AATVIGEGLA GSEAKFAAQM TQMARALGMR NTNFRNANGL TAEGHYSTAR
DMTVLGRRLF YDFPQYYSIF SRRSADAGIA TVASTNKRFL DSYEGADGIK TGYTRAAGFN
LTASAKRGSK RIIATVLGGT STAHRNQVMA QLLDAGFGKA PTRVREVKPA PPQLVAEKKV
RRTVQVARAE PRQAVANVQL STSDRPVARA STAAVVTPAA ISAAVSRAQA TAAPAPSGGG
STLTASARPT RKPGTGQFAN AAMDPEILAR AARPEARPEE GDTSETVAEP LNAARPKPSP
RGDRSAELST PAAGSPSLFV QSTQPQPESM ALLDTPAPAQ RSETIILASL DPDEETAPQA
TEIVARGSGS GGKNWGVSLG LFRSQREAEQ VLLKTALQES GALGSALSRV ANTKRGFEAN
FVGMNRETAE LACGRIAARQ QDCRIIGP
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