Gene Pden_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1704 
Symbol 
ID4581330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1689319 
End bp1690776 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content66% 
IMG OID639769018 
Productradical SAM domain-containing protein 
Protein accessionYP_915497 
Protein GI119384441 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.347799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGCCC TGACCCTGAT CCGCCACAAC GCCCACCGCG TCGATGTCGA CGGCCACGCC 
ATGCTGATGC ATGTGCCGAC GACCAGCCTG TTCGAACTCG ACGGCGTGGC GCGCGACGTC
TACGACCTGT TCCGGCGGGC GCCCGCCGTC GACCCCGACC TGATGCGCGC CGAGCTTGGC
CCGCGCCACG GCCCCGACAC GCTGTCGGAA TGCCTGCAAA GCTTTCTGGC ACTGGACATC
CTGCGCAATG CCGAGGCGGC GGACATTCCG CGCCCGGTGG TGAAGGTCGA GGAGATCCCC
CTCTCGACCA TCATCCTGAA CGTCAACACC GGCTGCAACC TGGCCTGCAC CTATTGCTAC
AAGGAGGACC TGACCACGCC CGCCAAGGGC CAGAAGATGG GCTTCGAGAC GGCGAAGGCC
AGTTTCGAGC TGCTGCTGAA ACAGGCCCAT GCGCGCGACC GGGTGAACGT GGTGTTCTTC
GGCGGCGAGC CGCTGTCCAA CATGCCGCTG ATCCGCGAGC TGGTGGCCTA TGCCAGGCCG
CGCGCGGCAG AGTTGGGCAA GGCGGTCGAT TTCTCGCTGA CCACCAATGC CACGCTGCTG
ACGCCGGAAC TGGTGGACTG GTTCGACGCG CATCGCTTTG CGCTGACGGT CAGCATGGAC
GGGCCCAAGG CGCTGCACGA CGCGAACCGC AAGACGGTGG GCGGCAAGGG CACCTACGAC
CTGGTGGCGC GCAACGTGCG GATGCTGCTT TCGCGCTATC GCTCGCGCCC CGTGGGCGGG
CGGGTGACGC TGACCCGCGG CGTGACCGAC GTGATCGGCA TCCACGATCA TCTGAAGAAC
GAGCTGGGCT TTCACGAGGT CGGCTTCGGC CCGGCGACCT CGGGGCCGAT CGCGGTCTTC
AACCTCGACG CCGAGGCGTT GAAGCGCGCC TTCGAGGACA TGAAGACGCT CGGCCGGCGC
TATGTCGAGG CCGCCTGCCG GGGCGAGAAC ATCGGCTTTT CCAACATGCA CCAACTGCTG
ACCGACATCG CGCAGGGCAC CAAGAAGGCC GTGCCCTGCG GCGCCGGGCT GGGGATGCTG
GCGGTGGACA AGGATGGGGA GCTGCATCTG TGCCACCGCT TCGTCGGCTC GAACCAGCCG
ACCTATGGCA ATGTCGCCAA GGGCATCGAC ATCCCCAAGC TCGCCGGCTT CATCGAGACC
GCGCAGGACC GCAGCGCCTA TGGCTGCAAG ACCTGCCGGA TACGCTCGAT CTGCGCCGGC
GGCTGCTATC ACGAAAGCTA TGCGCGGCAG GGCGATCCCT TCGCGCCGGT CTGGCACTAT
TGCGACCTGA TGCGCGACTG GGTGGATTTC GGCATCGAAT CCTATGTCCG CATCATGCAG
GCCAACCCGT CCTTCTTCCG CAGCCAGTTG GAGCCCCGGA TCGCCCGGTC CGGCACAGCA
AGGGAGGTTC TCCAATGA
 
Protein sequence
MGALTLIRHN AHRVDVDGHA MLMHVPTTSL FELDGVARDV YDLFRRAPAV DPDLMRAELG 
PRHGPDTLSE CLQSFLALDI LRNAEAADIP RPVVKVEEIP LSTIILNVNT GCNLACTYCY
KEDLTTPAKG QKMGFETAKA SFELLLKQAH ARDRVNVVFF GGEPLSNMPL IRELVAYARP
RAAELGKAVD FSLTTNATLL TPELVDWFDA HRFALTVSMD GPKALHDANR KTVGGKGTYD
LVARNVRMLL SRYRSRPVGG RVTLTRGVTD VIGIHDHLKN ELGFHEVGFG PATSGPIAVF
NLDAEALKRA FEDMKTLGRR YVEAACRGEN IGFSNMHQLL TDIAQGTKKA VPCGAGLGML
AVDKDGELHL CHRFVGSNQP TYGNVAKGID IPKLAGFIET AQDRSAYGCK TCRIRSICAG
GCYHESYARQ GDPFAPVWHY CDLMRDWVDF GIESYVRIMQ ANPSFFRSQL EPRIARSGTA
REVLQ