| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1698 |
|---|
| Symbol | |
|---|
| ID | 4581324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1681881 |
|---|
| End bp | 1682960 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639769012 |
|---|
| Product | fructose-1,6-bisphosphate aldolase |
|---|
| Protein accession | YP_915491 |
|---|
| Protein GI | 119384435 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0191] Fructose/tagatose bisphosphate aldolase |
|---|
| TIGRFAM ID | [TIGR00167] ketose-bisphosphate aldolases
[TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0076037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTCA TCACGCTGCG ACAGCTTCTG GACCACGCCG CCGAGCATGG CTATGGCGTG
CCCGCCTTCA ACATCAACAA CATGGAACAG GGCCTGGCCA TCGTGAAGGC CGCGGCCGAG
GTCGATGCGC CGGTGATCCT GCAGGCCAGC CGCGGCGCCC GCTCCTATGC CGGCGACATC
ATGCTGAAGC GCATGGTCGA GGCGCTGGCC GAGATGAACC CGGGCGTCCC GATCTGCCTG
CACCAGGACC ACGGCAACAA CCTCGCGACC TGCATGTCGG CGATCCGCCA CGGATTCACC
AGCGTGATGA TGGACGGCTC GCTGCACGAG GACATGAAGA CGCCCGCCGA TTACGACTAC
AACGTCGCGG TGACGGCCAA GGTCTCCGAG GCCGCCCATG CCGTCGGCGC CTCGGTCGAG
GGCGAGCTGG GCGTGCTGGG TTCGCTGGAG ACCGGCGAGG CGGCGGCCGA GGACGGCTCG
GGCGCCGAGG GCAAGCTGGA TCACAGCCAG CTTCTGACCG ATCCCGACCA GGCGGTGGAT
TTCGTCGCGC GCACGCGCTG CGACGCGCTG GCCATCGCCT GCGGCACCAG CCACGGCGCC
TACAAGTTCA GCCGCAAGCC CGATGGCGAC ATCCTGGCCA TGCATGTGAT CGAGGCGATC
CATGAACGCC TGTCCGGCAC GCATCTGGTC ATGCACGGCT CCAGCTCGGT GCCGCAATAC
CTGCAGGACC TCATCAACGA GGCGGGCGGC GAGATGCCCC AGACCTACGG CGTCCCGGTC
GAGGAGATCG AGCGCGGCAT CCGCCACGGC GTGCGCAAGG TCAACATCGA CACCGACTGC
CGCATGGCCA TGACCGGGCA GTTCCGCAAG GTCGCCCGCG AGCGCCCCGA GGAATTCGAC
CCGCGGAAAT TCCTGATCCC CGCGATGAAG GAACTGACCG CGCTGTGCCG CGACCGCTTC
GAGCGTTTCG GCACGGCGGG CCATGCCAGC AAGATCAGGG TCATCCCGAT GGACGAGATG
GCCCGGCGCT ATGCGTCGGG GGCGCTGGAC CCGGCAATCA CTGGCGCGAA AGCCGCCTGA
|
|---|
| Protein sequence | MALITLRQLL DHAAEHGYGV PAFNINNMEQ GLAIVKAAAE VDAPVILQAS RGARSYAGDI
MLKRMVEALA EMNPGVPICL HQDHGNNLAT CMSAIRHGFT SVMMDGSLHE DMKTPADYDY
NVAVTAKVSE AAHAVGASVE GELGVLGSLE TGEAAAEDGS GAEGKLDHSQ LLTDPDQAVD
FVARTRCDAL AIACGTSHGA YKFSRKPDGD ILAMHVIEAI HERLSGTHLV MHGSSSVPQY
LQDLINEAGG EMPQTYGVPV EEIERGIRHG VRKVNIDTDC RMAMTGQFRK VARERPEEFD
PRKFLIPAMK ELTALCRDRF ERFGTAGHAS KIRVIPMDEM ARRYASGALD PAITGAKAA
|
|---|
| |