| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1696 |
|---|
| Symbol | |
|---|
| ID | 4580104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1678991 |
|---|
| End bp | 1679863 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639769010 |
|---|
| Product | phosphoribulokinase |
|---|
| Protein accession | YP_915489 |
|---|
| Protein GI | 119384433 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3954] Phosphoribulokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.197903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA AACACCCGAT CATTTCCGTC ACCGGCTCGT CGGGCGCGGG CACCACCACG
ATCAAGAACA CTTTCGACCA GATCTTTCGC CGCGAAAAGA TCACCGCCGT CAGCATCGAG
GGCGACGCCT TCCACCGCTT CGACCGCGCG GCAATGAAGG CCGAGCTGGC GCGGCGAACC
GAGGCGGGCG ACCATACCTT CAGCCATTTC AGCGTCGAGG CCAACGAGCT TGAACGGCTG
GAGCAGGTGT TTCGCCATTA CGGCCAGACC GGCACCGGCC AGACCCGGCA TTACGTCCAT
GACGACCGCG AGGCCGAGAG ATACGGCACG CCCCCGGGTC ATTTCACGGC ATGGGAGGAT
TTCGCGGCGG ACTCGGATCT GCTGTTCTAC GAAGGGCTGC ACGGCGCGGT CAGGACCGAT
GGCATCGACA TCGCCGGGCA GGCGGACCTG AAGATCGGCG TGGTGCCGGT GATCAACCTG
GAATGGATCC AGAAGATCCA CCGCGACAAG GCCAGCCGGG GCTATTCGAC CGAGGCCGTG
ACCGACGTGA TCCTGCGCCG GATGCACGCC TATGTGCATG TGATCTGTCC GCAATTCACC
CAGACCGACA TCAACTTCCA GCGCGTGCCG GTGGTCGACA CCTCGAACCC CTTCATCGCC
CGCTGGATCC CGACGCCGGA TGAAAGCCTG GTCGTCATCC GCTTCAAGAG CCCGAGCGGC
ATCGATTTCC CCTACCTGAC CTCGATGATC CAGGGCTCGT GGATGAGCCG CGCCAATTCC
ATCGTCATTC CGGGGCCCAA GATGGACCTC GCCATGCAGC TGATCCTGAC GCCGATGATC
TTGCGTCTGG TCGGCGAATC GAAACGCGCC TGA
|
|---|
| Protein sequence | MSKKHPIISV TGSSGAGTTT IKNTFDQIFR REKITAVSIE GDAFHRFDRA AMKAELARRT
EAGDHTFSHF SVEANELERL EQVFRHYGQT GTGQTRHYVH DDREAERYGT PPGHFTAWED
FAADSDLLFY EGLHGAVRTD GIDIAGQADL KIGVVPVINL EWIQKIHRDK ASRGYSTEAV
TDVILRRMHA YVHVICPQFT QTDINFQRVP VVDTSNPFIA RWIPTPDESL VVIRFKSPSG
IDFPYLTSMI QGSWMSRANS IVIPGPKMDL AMQLILTPMI LRLVGESKRA
|
|---|
| |